Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AL121890.1-201ENST00000435457 205 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 RNU1-117P-201ENST00000517041 158 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 ACA59.2-201ENST00000517061 156 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.71□□□□□ -1.98
CHFRQ96EP1 AC021739.1-201ENST00000559631 174 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 MIR3923-201ENST00000579521 83 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 MIR3136-201ENST00000583498 78 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 PCGEM1.1-201ENST00000613431 131 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CHFRQ96EP1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.71□□□□□ -1.98
CHFRQ96EP1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHFRQ96EP1 U8.6-201ENST00000364939 135 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 RNU1-138P-201ENST00000384093 164 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 RNU6-905P-201ENST00000384434 107 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 RNU6-19P-201ENST00000384718 107 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 MIR518C-201ENST00000384822 101 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 MIR548A1-201ENST00000385041 97 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 MIRLET7F2-201ENST00000385277 83 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 SNORA3.2-201ENST00000408221 125 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 SNORA36B-201ENST00000410438 131 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 TOMM22P2-201ENST00000430735 237 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 AL031737.1-201ENST00000450125 223 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.7□□□□□ -1.98
CHFRQ96EP1 RPS26P45-201ENST00000471748 340 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 RNU7-115P-201ENST00000516433 55 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 RPL30P11-203ENST00000598995 310 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 MIR548AY-201ENST00000617669 107 ntBASIC2.7□□□□□ -1.98
CHFRQ96EP1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.7□□□□□ -1.98
CHFRQ96EP1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.7□□□□□ -1.98
CHFRQ96EP1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.69□□□□□ -1.98
CHFRQ96EP1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 Y_RNA.124-201ENST00000363339 93 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 RNU6-106P-201ENST00000384405 107 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 MIR181B1-201ENST00000385240 110 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 AC007064.1-201ENST00000412238 351 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.69□□□□□ -1.98
CHFRQ96EP1 CYCSP48-201ENST00000417124 323 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.69□□□□□ -1.98
CHFRQ96EP1 RNA5SP320-201ENST00000516263 124 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 RNU6-537P-201ENST00000517277 103 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 SNORD53-201ENST00000579969 78 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.69□□□□□ -1.98
CHFRQ96EP1 MIR4658-201ENST00000584344 65 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 AL034555.1-201ENST00000604816 211 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 TCL6_2.1-201ENST00000615162 119 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 AC005562.2-201ENST00000618264 111 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.69□□□□□ -1.98
CHFRQ96EP1 MIR6733-201ENST00000635723 61 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.69□□□□□ -1.98
CHFRQ96EP1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CHFRQ96EP1 AC007336.1-201ENST00000576365 3828 ntBASIC2.69□□□□□ -1.98
CHFRQ96EP1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHFRQ96EP1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CHFRQ96EP1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHFRQ96EP1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHFRQ96EP1 RNU4-15P-201ENST00000362613 141 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 RNU6-529P-201ENST00000363383 104 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 RNU6-640P-201ENST00000363693 105 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 Y_RNA.348-201ENST00000365403 103 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 RNU6-484P-201ENST00000384016 107 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 RNU6-880P-201ENST00000384526 107 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 MIR548B-201ENST00000385247 97 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 SNORA12.1-201ENST00000390873 148 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 AL590004.2-201ENST00000404787 371 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 U6atac.2-201ENST00000408644 118 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 RNY4P29-201ENST00000410801 97 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 HSPE1P21-201ENST00000438283 308 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 SRIP1-201ENST00000489235 288 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.68□□□□□ -1.98
CHFRQ96EP1 MIR5006-201ENST00000583027 110 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 AC091178.2-201ENST00000584401 117 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 AL121890.5-201ENST00000620848 304 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 AC064859.1-201ENST00000624741 174 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 AC002543.1-201ENST00000299783 1954 ntBASIC2.68□□□□□ -1.98
CHFRQ96EP1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.67□□□□□ -1.98
CHFRQ96EP1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
CHFRQ96EP1 RNU6-309P-201ENST00000364573 106 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 SNORA18.2-201ENST00000383865 132 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 SNORA70B-201ENST00000384210 135 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 SNORD116-13-201ENST00000384408 92 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 RNU6-443P-201ENST00000384780 107 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 RNU6-750P-201ENST00000390946 107 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.67□□□□□ -1.98
CHFRQ96EP1 RNU6-554P-201ENST00000410466 106 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 AC012308.1-201ENST00000451232 178 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.67□□□□□ -1.98
CHFRQ96EP1 Y_RNA.649-201ENST00000459077 103 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 AC023141.11-201ENST00000508864 202 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 RN7SKP19-201ENST00000516016 252 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 RNA5SP24-201ENST00000516478 95 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 RNU6-197P-201ENST00000516680 100 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.67□□□□□ -1.98
CHFRQ96EP1 EIF4A1P12-201ENST00000551910 141 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms