Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHISA4Q96DD7 MIR767-201ENST00000390228 109 ntBASIC3.05□□□□□ -1.92
SHISA4Q96DD7 RNU6-57P-201ENST00000411348 103 ntBASIC3.05□□□□□ -1.92
SHISA4Q96DD7 AC023449.1-201ENST00000454464 154 ntBASIC3.05□□□□□ -1.92
SHISA4Q96DD7 AL031183.1-201ENST00000457667 207 ntBASIC3.05□□□□□ -1.92
SHISA4Q96DD7 RPS29P12-201ENST00000460178 152 ntBASIC3.05□□□□□ -1.92
SHISA4Q96DD7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.05□□□□□ -1.92
SHISA4Q96DD7 RNA5SP112-201ENST00000515937 99 ntBASIC3.05□□□□□ -1.92
SHISA4Q96DD7 SNORA31.26-201ENST00000517250 137 ntBASIC3.05□□□□□ -1.92
SHISA4Q96DD7 AC006435.5-201ENST00000624486 112 ntBASIC3.05□□□□□ -1.92
SHISA4Q96DD7 FAM35CP-201ENST00000554755 2470 ntBASIC3.04□□□□□ -1.92
SHISA4Q96DD7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.04□□□□□ -1.92
SHISA4Q96DD7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SHISA4Q96DD7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHISA4Q96DD7 RNU6-1255P-201ENST00000363434 112 ntBASIC3.04□□□□□ -1.92
SHISA4Q96DD7 Y_RNA.294-201ENST00000364916 102 ntBASIC3.04□□□□□ -1.92
SHISA4Q96DD7 RNA5SP425-201ENST00000410336 112 ntBASIC3.04□□□□□ -1.92
SHISA4Q96DD7 RNU6-772P-201ENST00000516042 105 ntBASIC3.04□□□□□ -1.92
SHISA4Q96DD7 MIR449C-201ENST00000516047 92 ntBASIC3.04□□□□□ -1.92
SHISA4Q96DD7 RNU6-948P-201ENST00000516374 107 ntBASIC3.04□□□□□ -1.92
SHISA4Q96DD7 AC027419.1-201ENST00000522976 328 ntBASIC3.04□□□□□ -1.92
SHISA4Q96DD7 MIR2681-201ENST00000581814 105 ntBASIC3.04□□□□□ -1.92
SHISA4Q96DD7 MIR4635-201ENST00000583759 79 ntBASIC3.04□□□□□ -1.92
SHISA4Q96DD7 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.04□□□□□ -1.92
SHISA4Q96DD7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.03□□□□□ -1.92
SHISA4Q96DD7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHISA4Q96DD7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHISA4Q96DD7 RNU6-978P-201ENST00000364371 103 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 RNU6-755P-201ENST00000364400 103 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 SNORA14A-201ENST00000364773 135 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 RNU6-234P-201ENST00000365229 104 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 SNORD18B-201ENST00000365659 72 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 SNORA22-201ENST00000383907 134 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 AL158147.1-201ENST00000443970 75 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 RNA5SP282-201ENST00000516355 108 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 RNU6-589P-201ENST00000516485 107 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 RNA5SP153-201ENST00000516498 76 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 AC133485.4-201ENST00000561835 220 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 AC138907.4-201ENST00000570107 226 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 AC024614.2-201ENST00000577584 372 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 MIR4679-2-201ENST00000578358 77 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 AL049861.1-201ENST00000603130 150 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 AL021707.8-201ENST00000609428 183 ntBASIC3.03□□□□□ -1.92
SHISA4Q96DD7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.03□□□□□ -1.92
SHISA4Q96DD7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.03□□□□□ -1.92
SHISA4Q96DD7 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.03□□□□□ -1.93
SHISA4Q96DD7 AC138915.1-201ENST00000565427 1685 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SHISA4Q96DD7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
SHISA4Q96DD7 Y_RNA.4-201ENST00000362333 112 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 U8.1-201ENST00000362843 134 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 RNA5SP139-201ENST00000364340 117 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 SNORD114-30-201ENST00000364448 72 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 SNORD31B-201ENST00000364977 69 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 RNU6-484P-201ENST00000384016 107 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 SNORA72-201ENST00000384339 132 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 RNA5SP354-201ENST00000391247 136 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 AC008134.1-201ENST00000420943 193 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.02□□□□□ -1.93
SHISA4Q96DD7 AC010531.2-201ENST00000465012 153 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 AC090515.1-201ENST00000465295 476 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 RNU6-63P-201ENST00000516690 95 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.02□□□□□ -1.93
SHISA4Q96DD7 AC131055.1-201ENST00000584626 316 ntBASIC3.02□□□□□ -1.93
SHISA4Q96DD7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SHISA4Q96DD7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHISA4Q96DD7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SHISA4Q96DD7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.01□□□□□ -1.93
SHISA4Q96DD7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SHISA4Q96DD7 RNU6-1336P-201ENST00000383886 109 ntBASIC3.01□□□□□ -1.93
SHISA4Q96DD7 RNU6-136P-201ENST00000384663 107 ntBASIC3.01□□□□□ -1.93
SHISA4Q96DD7 RNA5SP511-201ENST00000410487 115 ntBASIC3.01□□□□□ -1.93
SHISA4Q96DD7 RNU2-70P-201ENST00000410718 179 ntBASIC3.01□□□□□ -1.93
SHISA4Q96DD7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.01□□□□□ -1.93
SHISA4Q96DD7 AC016717.1-201ENST00000448918 286 ntBASIC3.01□□□□□ -1.93
SHISA4Q96DD7 AC016925.1-201ENST00000458303 298 ntBASIC3.01□□□□□ -1.93
SHISA4Q96DD7 AC080013.2-201ENST00000460866 323 ntBASIC3.01□□□□□ -1.93
SHISA4Q96DD7 RNA5SP458-201ENST00000516188 119 ntBASIC3.01□□□□□ -1.93
SHISA4Q96DD7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHISA4Q96DD7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHISA4Q96DD7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3□□□□□ -1.93
SHISA4Q96DD7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SHISA4Q96DD7 RNU6-486P-201ENST00000363116 107 ntBASIC3□□□□□ -1.93
SHISA4Q96DD7 SNORA26-201ENST00000391286 122 ntBASIC3□□□□□ -1.93
SHISA4Q96DD7 RPL39P40-201ENST00000445481 146 ntBASIC3□□□□□ -1.93
SHISA4Q96DD7 RNA5SP320-201ENST00000516263 124 ntBASIC3□□□□□ -1.93
SHISA4Q96DD7 RNU6-1061P-201ENST00000516530 99 ntBASIC3□□□□□ -1.93
SHISA4Q96DD7 RNA5SP170-201ENST00000517150 101 ntBASIC3□□□□□ -1.93
SHISA4Q96DD7 AC025647.1-201ENST00000517879 253 ntBASIC3□□□□□ -1.93
SHISA4Q96DD7 AC015720.1-201ENST00000565251 277 ntBASIC3□□□□□ -1.93
SHISA4Q96DD7 MIR3613-201ENST00000579844 87 ntBASIC3□□□□□ -1.93
SHISA4Q96DD7 AL670379.3-201ENST00000605040 251 ntBASIC3□□□□□ -1.93
SHISA4Q96DD7 uc_338.4-201ENST00000616635 176 ntBASIC3□□□□□ -1.93
SHISA4Q96DD7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3□□□□□ -1.93
SHISA4Q96DD7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3□□□□□ -1.93
SHISA4Q96DD7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SHISA4Q96DD7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
SHISA4Q96DD7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHISA4Q96DD7 Y_RNA.114-201ENST00000363265 113 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 RNU6-1240P-201ENST00000365155 104 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms