Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-CQ95604 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
HLA-CQ95604 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-CQ95604 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-CQ95604 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-CQ95604 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
HLA-CQ95604 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-CQ95604 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-CQ95604 RNU6-1084P-201ENST00000362498 107 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 SNORA5B-201ENST00000363786 132 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 SNORD74.4-201ENST00000364129 80 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 RNA5SP482-201ENST00000391269 118 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 AC009238.1-201ENST00000442165 424 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 AC009237.6-201ENST00000446969 424 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 ATP5J2P3-201ENST00000451550 258 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 SCARNA23-201ENST00000516060 130 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 AC026421.1-201ENST00000519101 163 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 AP003484.1-201ENST00000530974 250 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 RPL12P50-201ENST00000603116 116 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 MIR7106-201ENST00000612419 65 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 CTSLP2-204ENST00000629029 392 ntBASIC3.77□□□□□ -1.81
HLA-CQ95604 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-CQ95604 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-CQ95604 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HLA-CQ95604 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HLA-CQ95604 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-CQ95604 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-CQ95604 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-CQ95604 SNORA8-201ENST00000384574 139 ntBASIC3.76□□□□□ -1.81
HLA-CQ95604 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-CQ95604 SNORA18.7-201ENST00000516910 131 ntBASIC3.76□□□□□ -1.81
HLA-CQ95604 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-CQ95604 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-CQ95604 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-CQ95604 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-CQ95604 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HLA-CQ95604 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-CQ95604 SNORD68-201ENST00000363214 84 ntBASIC3.75□□□□□ -1.81
HLA-CQ95604 Y_RNA.351-201ENST00000365436 96 ntBASIC3.75□□□□□ -1.81
HLA-CQ95604 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-CQ95604 RNU6-816P-201ENST00000390914 107 ntBASIC3.75□□□□□ -1.81
HLA-CQ95604 RNU6-1268P-201ENST00000391214 107 ntBASIC3.75□□□□□ -1.81
HLA-CQ95604 RNU6-1239P-201ENST00000391310 107 ntBASIC3.75□□□□□ -1.81
HLA-CQ95604 Y_RNA.601-201ENST00000410500 113 ntBASIC3.75□□□□□ -1.81
HLA-CQ95604 SNORD36C-201ENST00000516733 66 ntBASIC3.75□□□□□ -1.81
HLA-CQ95604 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.75□□□□□ -1.81
HLA-CQ95604 MIR4672-201ENST00000583126 81 ntBASIC3.75□□□□□ -1.81
HLA-CQ95604 AC025521.1-201ENST00000621624 286 ntBASIC3.75□□□□□ -1.81
HLA-CQ95604 MIR4727-201ENST00000622232 55 ntBASIC3.75□□□□□ -1.81
HLA-CQ95604 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
HLA-CQ95604 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-CQ95604 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
HLA-CQ95604 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HLA-CQ95604 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-CQ95604 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-CQ95604 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HLA-CQ95604 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-CQ95604 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HLA-CQ95604 SNORA26.7-201ENST00000391288 122 ntBASIC3.74□□□□□ -1.81
HLA-CQ95604 RNU6-938P-201ENST00000411285 103 ntBASIC3.74□□□□□ -1.81
HLA-CQ95604 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-CQ95604 SNORD45.4-201ENST00000516629 73 ntBASIC3.74□□□□□ -1.81
HLA-CQ95604 AC007536.1-201ENST00000533382 349 ntBASIC3.74□□□□□ -1.81
HLA-CQ95604 MIR4276-201ENST00000584832 70 ntBASIC3.74□□□□□ -1.81
HLA-CQ95604 AC078899.2-201ENST00000595282 212 ntBASIC3.74□□□□□ -1.81
HLA-CQ95604 FAM71BP1-201ENST00000604431 523 ntBASIC3.74□□□□□ -1.81
HLA-CQ95604 AL355297.2-201ENST00000604792 129 ntBASIC3.74□□□□□ -1.81
HLA-CQ95604 AC110741.2-201ENST00000605278 268 ntBASIC3.74□□□□□ -1.81
HLA-CQ95604 AL590808.1-201ENST00000618696 141 ntBASIC3.74□□□□□ -1.81
HLA-CQ95604 AC091932.4-201ENST00000623386 200 ntBASIC3.74□□□□□ -1.81
HLA-CQ95604 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-CQ95604 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-CQ95604 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HLA-CQ95604 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-CQ95604 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-CQ95604 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HLA-CQ95604 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-CQ95604 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.73□□□□□ -1.81
HLA-CQ95604 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-CQ95604 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-CQ95604 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-CQ95604 RNU6-661P-201ENST00000362409 107 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 RNY3P2-201ENST00000362918 102 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 RNU6-1134P-201ENST00000365156 101 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 Y_RNA.507-201ENST00000384500 99 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 RNU6-1104P-201ENST00000384723 104 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 AC096949.1-201ENST00000412047 152 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-CQ95604 AL035398.1-201ENST00000430869 322 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 AC109327.2-201ENST00000448339 378 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 U3.44-201ENST00000458938 192 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 AC023141.11-201ENST00000508864 202 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 RNA5SP208-201ENST00000516156 78 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 AC100770.1-201ENST00000532310 322 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 AC008011.1-201ENST00000545989 227 ntBASIC3.73□□□□□ -1.81
HLA-CQ95604 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-CQ95604 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-CQ95604 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-CQ95604 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms