Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 SUMO2P16-201ENST00000519475 264 ntBASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 RNU6-91P-201ENST00000607774 107 ntBASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 MIR3199-2-201ENST00000636243 86 ntBASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 AC004944.1-201ENST00000517807 3059 ntBASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 SNORD115-13-201ENST00000363358 82 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 SNORD115-16-201ENST00000363887 82 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 RNU6-219P-201ENST00000364728 107 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 SNORD115-1-201ENST00000364961 82 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 RNU6-1240P-201ENST00000365155 104 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 SNORD24-201ENST00000383884 75 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 SNORD67-201ENST00000390833 111 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 RNU6-816P-201ENST00000390914 107 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 RNU6-1268P-201ENST00000391214 107 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 RNU6-1239P-201ENST00000391310 107 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 AC016717.1-201ENST00000448918 286 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 AC107626.1-201ENST00000471084 183 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 Y_RNA.666-201ENST00000516187 112 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 AC011604.1-201ENST00000545978 196 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 MIR4662A-201ENST00000637499 67 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 FAM35CP-201ENST00000554755 2470 ntBASIC3.62□□□□□ -1.83
NEDD1Q8NHV4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 RNU1-72P-201ENST00000362976 153 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 RNU6-1210P-201ENST00000363775 107 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 Y_RNA.190-201ENST00000363964 101 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 RNU6-748P-201ENST00000384648 107 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 MIR759-201ENST00000390224 91 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 NDUFB4P4-201ENST00000404822 243 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 RNU6-57P-201ENST00000411348 103 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 AC096949.1-201ENST00000412047 152 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 BTF3P4-201ENST00000418852 495 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 RPL30P4-201ENST00000429309 333 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 RPS12P18-201ENST00000442381 270 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 RN7SKP289-201ENST00000517244 295 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 MIR5197-201ENST00000583721 112 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 RPL17P51-201ENST00000605218 238 ntBASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.61□□□□□ -1.83
NEDD1Q8NHV4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.6□□□□□ -1.83
NEDD1Q8NHV4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.6□□□□□ -1.83
NEDD1Q8NHV4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NEDD1Q8NHV4 MIR22-201ENST00000362190 85 ntBASIC3.6□□□□□ -1.83
NEDD1Q8NHV4 RNU6-944P-201ENST00000364023 107 ntBASIC3.6□□□□□ -1.83
NEDD1Q8NHV4 SNORA71.1-201ENST00000364523 117 ntBASIC3.6□□□□□ -1.83
NEDD1Q8NHV4 RNU6-690P-201ENST00000365242 106 ntBASIC3.6□□□□□ -1.83
NEDD1Q8NHV4 RNU6-975P-201ENST00000384296 105 ntBASIC3.6□□□□□ -1.83
NEDD1Q8NHV4 AC016909.1-201ENST00000415916 166 ntBASIC3.6□□□□□ -1.83
NEDD1Q8NHV4 AC006539.3-201ENST00000454258 129 ntBASIC3.6□□□□□ -1.83
NEDD1Q8NHV4 RNU7-123P-201ENST00000515911 60 ntBASIC3.6□□□□□ -1.83
NEDD1Q8NHV4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
NEDD1Q8NHV4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 AC073325.2-201ENST00000339545 159 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 RNU6-170P-201ENST00000362832 104 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 RNU6-655P-201ENST00000362858 107 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 RNU1-22P-201ENST00000363334 158 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 SNORA44-201ENST00000384584 132 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 MIR518F-201ENST00000384973 87 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 AC004941.2-201ENST00000427009 228 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 AC009238.1-201ENST00000442165 424 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 AC009237.6-201ENST00000446969 424 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 RNA5SP217-201ENST00000515959 91 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 RNU6-693P-201ENST00000516134 107 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 RNU5F-4P-201ENST00000516581 114 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 AC021443.1-201ENST00000604478 211 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
NEDD1Q8NHV4 AC026241.1-201ENST00000517873 2142 ntBASIC3.59□□□□□ -1.84
NEDD1Q8NHV4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NEDD1Q8NHV4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.59□□□□□ -1.84
NEDD1Q8NHV4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 AP003122.5-201ENST00000527668 3766 ntBASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 SNORD115-35-201ENST00000365122 82 ntBASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 MIR1912-201ENST00000410389 80 ntBASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 AC068657.1-201ENST00000520807 306 ntBASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 AC006435.5-201ENST00000624486 112 ntBASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
NEDD1Q8NHV4 AL513477.1-202ENST00000417061 214 ntBASIC3.57□□□□□ -1.84
NEDD1Q8NHV4 MIR449C-201ENST00000516047 92 ntBASIC3.57□□□□□ -1.84
NEDD1Q8NHV4 SNORA64.4-201ENST00000516632 81 ntBASIC3.57□□□□□ -1.84
NEDD1Q8NHV4 MIR3163-201ENST00000581592 73 ntBASIC3.57□□□□□ -1.84
NEDD1Q8NHV4 JPX_2.1-201ENST00000614161 69 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 250.9 ms