Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 MIR6079-201ENST00000635807 62 ntBASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 Y_RNA.376-201ENST00000365638 108 ntBASIC2.41□□□□□ -2.02
PRPF38AQ8NAV1 RNU4-52P-201ENST00000384209 138 ntBASIC2.41□□□□□ -2.02
PRPF38AQ8NAV1 Y_RNA.461-201ENST00000384263 103 ntBASIC2.41□□□□□ -2.02
PRPF38AQ8NAV1 RNU2-2P-201ENST00000410396 191 ntBASIC2.41□□□□□ -2.02
PRPF38AQ8NAV1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.41□□□□□ -2.02
PRPF38AQ8NAV1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.41□□□□□ -2.02
PRPF38AQ8NAV1 MIR4769-201ENST00000584126 77 ntBASIC2.41□□□□□ -2.02
PRPF38AQ8NAV1 ZNF355P-201ENST00000427301 3216 ntBASIC2.4□□□□□ -2.02
PRPF38AQ8NAV1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.4□□□□□ -2.02
PRPF38AQ8NAV1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 RNU4-80P-201ENST00000363200 141 ntBASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 Y_RNA.418-201ENST00000384029 102 ntBASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 MIR676-201ENST00000390702 67 ntBASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 MIR764-201ENST00000390811 85 ntBASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 snosnR66.1-201ENST00000391095 99 ntBASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 HMGN2P19-201ENST00000425149 265 ntBASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 FTH1P12-201ENST00000432137 551 ntBASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 AL162725.1-201ENST00000435405 301 ntBASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 MRPS17P9-201ENST00000511924 393 ntBASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 MIR3145-201ENST00000580727 82 ntBASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 AL096840.1-201ENST00000603287 93 ntBASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
PRPF38AQ8NAV1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.39□□□□□ -2.03
PRPF38AQ8NAV1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PRPF38AQ8NAV1 AL359851.1-201ENST00000569460 4997 ntBASIC2.39□□□□□ -2.03
PRPF38AQ8NAV1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PRPF38AQ8NAV1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.39□□□□□ -2.03
PRPF38AQ8NAV1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.39□□□□□ -2.03
PRPF38AQ8NAV1 RPL23AP42-201ENST00000471152 471 ntBASIC2.39□□□□□ -2.03
PRPF38AQ8NAV1 RNU6-1338P-201ENST00000516328 91 ntBASIC2.39□□□□□ -2.03
PRPF38AQ8NAV1 RNU6-341P-201ENST00000516973 96 ntBASIC2.39□□□□□ -2.03
PRPF38AQ8NAV1 AC005972.2-201ENST00000604690 348 ntBASIC2.39□□□□□ -2.03
PRPF38AQ8NAV1 MIR335-201ENST00000362173 94 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 RNA5SP511-201ENST00000410487 115 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 RNA5SP338-201ENST00000410495 85 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 COX6CP10-201ENST00000416832 224 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 AC245047.3-201ENST00000429428 127 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 MTCO1P5-201ENST00000433573 344 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 RPS20P10-201ENST00000451209 253 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 U8.19-201ENST00000459095 133 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 SERF1AP1-201ENST00000514575 187 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 RNU6-191P-201ENST00000516295 94 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 RNU6-63P-201ENST00000516690 95 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 MIR514B-201ENST00000516774 80 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 RNU7-116P-201ENST00000516940 62 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 AC136628.3-201ENST00000521868 290 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 AL358944.1-201ENST00000528537 144 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 AL161670.1-201ENST00000554348 137 ntBASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.38□□□□□ -2.03
PRPF38AQ8NAV1 AL391987.6-201ENST00000305671 199 ntBASIC2.37□□□□□ -2.03
PRPF38AQ8NAV1 Y_RNA.310-201ENST00000365063 113 ntBASIC2.37□□□□□ -2.03
PRPF38AQ8NAV1 Y_RNA.512-201ENST00000384518 102 ntBASIC2.37□□□□□ -2.03
PRPF38AQ8NAV1 U8.13-201ENST00000390842 128 ntBASIC2.37□□□□□ -2.03
PRPF38AQ8NAV1 RNU6-360P-201ENST00000390944 104 ntBASIC2.37□□□□□ -2.03
PRPF38AQ8NAV1 HSPE1P9-201ENST00000440046 311 ntBASIC2.37□□□□□ -2.03
PRPF38AQ8NAV1 AC108210.2-201ENST00000503681 201 ntBASIC2.37□□□□□ -2.03
PRPF38AQ8NAV1 AC015720.1-201ENST00000565251 277 ntBASIC2.37□□□□□ -2.03
PRPF38AQ8NAV1 AL162424.1-201ENST00000602325 221 ntBASIC2.37□□□□□ -2.03
PRPF38AQ8NAV1 AC004832.4-201ENST00000608952 331 ntBASIC2.37□□□□□ -2.03
PRPF38AQ8NAV1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 Y_RNA.288-201ENST00000364854 92 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 RNU6-439P-201ENST00000384188 106 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 RNU6-196P-201ENST00000384315 107 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 RNA5SP109-201ENST00000391010 116 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 RN7SKP200-201ENST00000410564 320 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 AL139156.1-201ENST00000412785 841 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 AL606517.2-201ENST00000442855 241 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 AC091021.1-201ENST00000468051 388 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 RNU6-1096P-201ENST00000517089 102 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 DEFB108E-201ENST00000524692 240 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 AP002004.2-201ENST00000531656 154 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 MIR5002-201ENST00000584713 97 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 AC022217.4-201ENST00000604389 163 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.36□□□□□ -2.03
PRPF38AQ8NAV1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 SNORD116-13-201ENST00000384408 92 ntBASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 AC019129.1-201ENST00000403786 261 ntBASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 HSPE1P21-201ENST00000438283 308 ntBASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 RPS27P1-201ENST00000450552 247 ntBASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 RNU6-717P-201ENST00000459076 104 ntBASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 snoU13.27-201ENST00000459278 104 ntBASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 RNU2-56P-201ENST00000516826 190 ntBASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 AC091178.2-201ENST00000584401 117 ntBASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 AC002984.1-201ENST00000591692 448 ntBASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 SNORA28-201ENST00000606769 126 ntBASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 AC103810.8-201ENST00000607347 118 ntBASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.35□□□□□ -2.03
PRPF38AQ8NAV1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 RNU6-661P-201ENST00000362409 107 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 Y_RNA.16-201ENST00000362421 102 ntBASIC2.34□□□□□ -2.03
PRPF38AQ8NAV1 RNA5SP138-201ENST00000365098 114 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms