Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AL157834.3-201ENST00000615543 103 ntBASIC1.16□□□□□ -2.22
CCDC89Q8N998 AL359757.2-201ENST00000624309 274 ntBASIC1.16□□□□□ -2.22
CCDC89Q8N998 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
CCDC89Q8N998 Y_RNA.336-201ENST00000365307 109 ntBASIC1.15□□□□□ -2.23
CCDC89Q8N998 SNORA11.2-201ENST00000408318 127 ntBASIC1.15□□□□□ -2.23
CCDC89Q8N998 Y_RNA.605-201ENST00000410577 105 ntBASIC1.15□□□□□ -2.23
CCDC89Q8N998 POLR2J4-204ENST00000418424 324 ntBASIC1.15□□□□□ -2.23
CCDC89Q8N998 MRPS18CP6-201ENST00000423587 223 ntBASIC1.15□□□□□ -2.23
CCDC89Q8N998 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC89Q8N998 AC114811.1-201ENST00000507207 168 ntBASIC1.15□□□□□ -2.23
CCDC89Q8N998 RNU6-120P-201ENST00000516077 103 ntBASIC1.15□□□□□ -2.23
CCDC89Q8N998 AC055872.1-201ENST00000570978 278 ntBASIC1.15□□□□□ -2.23
CCDC89Q8N998 AC005176.2-201ENST00000596933 147 ntBASIC1.15□□□□□ -2.23
CCDC89Q8N998 AC025253.1-201ENST00000613623 543 ntBASIC1.15□□□□□ -2.23
CCDC89Q8N998 AC240442.1-201ENST00000616055 283 ntBASIC1.15□□□□□ -2.23
CCDC89Q8N998 AC022306.2-201ENST00000617563 647 ntBASIC1.15□□□□□ -2.23
CCDC89Q8N998 AC008163.1-202ENST00000636004 2889 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC89Q8N998 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC89Q8N998 U8.5-201ENST00000364528 136 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 SNORD81.2-201ENST00000365153 76 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 SNORD78.2-201ENST00000391076 69 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 AC245047.8-201ENST00000456455 284 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 SNORD124-201ENST00000459577 104 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 AC093852.1-201ENST00000503587 266 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 RNU6-470P-201ENST00000515954 104 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC89Q8N998 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC89Q8N998 AC011604.1-201ENST00000545978 196 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 MIR4762-201ENST00000585261 75 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 AL020996.3-201ENST00000606617 222 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 AL096861.1-201ENST00000610899 123 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 AL591926.4-201ENST00000616895 298 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 AL353997.5-201ENST00000618886 171 ntBASIC1.14□□□□□ -2.23
CCDC89Q8N998 Y_RNA.101-201ENST00000363154 102 ntBASIC1.13□□□□□ -2.23
CCDC89Q8N998 Y_RNA.248-201ENST00000364501 109 ntBASIC1.13□□□□□ -2.23
CCDC89Q8N998 RNU6-890P-201ENST00000384121 107 ntBASIC1.13□□□□□ -2.23
CCDC89Q8N998 FGF7P8-201ENST00000402994 292 ntBASIC1.13□□□□□ -2.23
CCDC89Q8N998 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC89Q8N998 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC89Q8N998 U8.19-201ENST00000459095 133 ntBASIC1.13□□□□□ -2.23
CCDC89Q8N998 RNU7-21P-201ENST00000459430 62 ntBASIC1.13□□□□□ -2.23
CCDC89Q8N998 RPS26P48-201ENST00000491713 339 ntBASIC1.13□□□□□ -2.23
CCDC89Q8N998 AC133104.2-201ENST00000615272 193 ntBASIC1.13□□□□□ -2.23
CCDC89Q8N998 RNU6-626P-201ENST00000363354 107 ntBASIC1.12□□□□□ -2.23
CCDC89Q8N998 RNU1-36P-201ENST00000365130 165 ntBASIC1.12□□□□□ -2.23
CCDC89Q8N998 SNORA22-201ENST00000383907 134 ntBASIC1.12□□□□□ -2.23
CCDC89Q8N998 SNORA22C-201ENST00000384614 134 ntBASIC1.12□□□□□ -2.23
CCDC89Q8N998 BTF3P4-201ENST00000418852 495 ntBASIC1.12□□□□□ -2.23
CCDC89Q8N998 AC108667.1-201ENST00000428618 249 ntBASIC1.12□□□□□ -2.23
CCDC89Q8N998 RPEP5-201ENST00000441137 268 ntBASIC1.12□□□□□ -2.23
CCDC89Q8N998 RNU7-90P-201ENST00000459216 62 ntBASIC1.12□□□□□ -2.23
CCDC89Q8N998 AC015712.3-201ENST00000559380 164 ntBASIC1.12□□□□□ -2.23
CCDC89Q8N998 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC89Q8N998 AL391903.3-201ENST00000612158 163 ntBASIC1.12□□□□□ -2.23
CCDC89Q8N998 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.12□□□□□ -2.23
CCDC89Q8N998 AL008636.1-201ENST00000625038 1018 ntBASIC1.12□□□□□ -2.23
CCDC89Q8N998 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CCDC89Q8N998 RNU6-324P-201ENST00000363957 106 ntBASIC1.11□□□□□ -2.23
CCDC89Q8N998 RNU6-969P-201ENST00000383900 105 ntBASIC1.11□□□□□ -2.23
CCDC89Q8N998 RNU6-20P-201ENST00000384106 107 ntBASIC1.11□□□□□ -2.23
CCDC89Q8N998 RNU2-61P-201ENST00000411069 191 ntBASIC1.11□□□□□ -2.23
CCDC89Q8N998 MTND1P2-201ENST00000430604 821 ntBASIC1.11□□□□□ -2.23
CCDC89Q8N998 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.11□□□□□ -2.23
CCDC89Q8N998 AC093019.1-201ENST00000443135 252 ntBASIC1.11□□□□□ -2.23
CCDC89Q8N998 Y_RNA.653-201ENST00000459091 95 ntBASIC1.11□□□□□ -2.23
CCDC89Q8N998 RNU7-169P-201ENST00000459456 61 ntBASIC1.11□□□□□ -2.23
CCDC89Q8N998 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC89Q8N998 PDCD5P2-201ENST00000507570 312 ntBASIC1.11□□□□□ -2.23
CCDC89Q8N998 SNORD116-13-201ENST00000384408 92 ntBASIC1.1□□□□□ -2.23
CCDC89Q8N998 MIR628-201ENST00000385229 95 ntBASIC1.1□□□□□ -2.23
CCDC89Q8N998 MIR1298-201ENST00000408783 112 ntBASIC1.1□□□□□ -2.23
CCDC89Q8N998 RNU6-1304P-201ENST00000411374 106 ntBASIC1.1□□□□□ -2.23
CCDC89Q8N998 CHEK2P4-201ENST00000450340 246 ntBASIC1.1□□□□□ -2.23
CCDC89Q8N998 RPS20P10-201ENST00000451209 253 ntBASIC1.1□□□□□ -2.23
CCDC89Q8N998 RPL30P15-201ENST00000457129 321 ntBASIC1.1□□□□□ -2.23
CCDC89Q8N998 RNU6-1012P-201ENST00000516606 109 ntBASIC1.1□□□□□ -2.23
CCDC89Q8N998 AC113139.1-201ENST00000605049 239 ntBASIC1.1□□□□□ -2.23
CCDC89Q8N998 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
CCDC89Q8N998 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC89Q8N998 Y_RNA.446-201ENST00000384178 104 ntBASIC1.09□□□□□ -2.23
CCDC89Q8N998 MIR942-201ENST00000401111 86 ntBASIC1.09□□□□□ -2.23
CCDC89Q8N998 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC89Q8N998 RNU6-559P-201ENST00000516151 98 ntBASIC1.09□□□□□ -2.23
CCDC89Q8N998 RNU6-155P-201ENST00000516347 100 ntBASIC1.09□□□□□ -2.23
CCDC89Q8N998 RNU6-911P-201ENST00000516523 104 ntBASIC1.09□□□□□ -2.23
CCDC89Q8N998 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.09□□□□□ -2.23
CCDC89Q8N998 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
CCDC89Q8N998 U2.1-201ENST00000618978 145 ntBASIC1.09□□□□□ -2.23
CCDC89Q8N998 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
CCDC89Q8N998 Y_RNA.230-201ENST00000364348 109 ntBASIC1.08□□□□□ -2.24
CCDC89Q8N998 Y_RNA.314-201ENST00000365114 102 ntBASIC1.08□□□□□ -2.24
CCDC89Q8N998 MIR136-201ENST00000385207 82 ntBASIC1.08□□□□□ -2.24
CCDC89Q8N998 SNORA75.2-201ENST00000391138 150 ntBASIC1.08□□□□□ -2.24
CCDC89Q8N998 SNORA75.3-201ENST00000391231 150 ntBASIC1.08□□□□□ -2.24
CCDC89Q8N998 Y_RNA.619-201ENST00000410951 90 ntBASIC1.08□□□□□ -2.24
CCDC89Q8N998 AP1B1P2-201ENST00000416196 106 ntBASIC1.08□□□□□ -2.24
CCDC89Q8N998 AC099799.1-201ENST00000439809 192 ntBASIC1.08□□□□□ -2.24
CCDC89Q8N998 AC090142.3-201ENST00000519012 385 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms