Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.8□□□□□ -2.12
PCDH20Q8N6Y1 MIR3145-201ENST00000580727 82 ntBASIC1.8□□□□□ -2.12
PCDH20Q8N6Y1 MIR3124-201ENST00000582636 67 ntBASIC1.8□□□□□ -2.12
PCDH20Q8N6Y1 AL162730.1-201ENST00000605734 292 ntBASIC1.8□□□□□ -2.12
PCDH20Q8N6Y1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.8□□□□□ -2.12
PCDH20Q8N6Y1 RNU6-117P-201ENST00000365415 107 ntBASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 Y_RNA.376-201ENST00000365638 108 ntBASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 SNORA8-201ENST00000384574 139 ntBASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 Y_RNA.569-201ENST00000384749 103 ntBASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 RNU6-1203P-201ENST00000410703 110 ntBASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 AL158823.1-201ENST00000418441 478 ntBASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 AC024067.1-201ENST00000426199 223 ntBASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 RPS26P45-201ENST00000471748 340 ntBASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 RNU6-1278P-201ENST00000516130 107 ntBASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 RNU6-250P-201ENST00000516958 103 ntBASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 AC084364.2-201ENST00000546924 395 ntBASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.79□□□□□ -2.12
PCDH20Q8N6Y1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 Y_RNA.136-201ENST00000363444 102 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 Y_RNA.418-201ENST00000384029 102 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 Y_RNA.461-201ENST00000384263 103 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 RNA5SP100-201ENST00000410903 110 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 RNA5SP59-201ENST00000410922 110 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 AC069257.2-201ENST00000441819 155 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 TRBVB-201ENST00000477100 408 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 MIR4419B-201ENST00000577260 68 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 MIR4255-201ENST00000579351 72 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 MIR3683-201ENST00000580847 82 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 AC073413.2-201ENST00000604332 360 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
PCDH20Q8N6Y1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.78□□□□□ -2.13
PCDH20Q8N6Y1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 RNU4-80P-201ENST00000363200 141 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-112P-201ENST00000363599 104 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-326P-201ENST00000365480 107 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 MIR568-201ENST00000385036 95 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 SNORA53-201ENST00000391141 249 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 MIR1302-3-201ENST00000408128 138 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 MIR1302-6-201ENST00000408466 90 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 MTND4LP30-201ENST00000454092 297 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 HMGN1P10-201ENST00000474557 553 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 AL163195.1-201ENST00000496941 348 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 SNORA25.15-201ENST00000516487 89 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 RNU2-31P-201ENST00000516954 155 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 AL161670.1-201ENST00000554348 137 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 AC037487.3-201ENST00000606668 112 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 U6.104-201ENST00000637979 90 ntBASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PCDH20Q8N6Y1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 Y_RNA.16-201ENST00000362421 102 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 SNORA63D-201ENST00000364359 132 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-296P-201ENST00000384608 107 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-376P-201ENST00000384731 106 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 MIR520A-201ENST00000384862 85 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 RNU11-5P-201ENST00000391216 129 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 AL627390.1-201ENST00000396055 340 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-855P-201ENST00000410395 104 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 RPL23AP6-201ENST00000446637 472 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-1338P-201ENST00000516328 91 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-63P-201ENST00000516690 95 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 RPL21P9-201ENST00000556149 474 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 MIR3618-201ENST00000580330 88 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 AP001282.2-201ENST00000616149 309 ntBASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PCDH20Q8N6Y1 SNORA25.1-201ENST00000362326 128 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-472P-201ENST00000384299 107 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 Y_RNA.483-201ENST00000384380 101 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 MT-TW-201ENST00000387382 68 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-1248P-201ENST00000391096 64 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 RNA5SP212-201ENST00000391223 107 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 MTCO1P5-201ENST00000433573 344 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 RNA5SP57-201ENST00000459463 123 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 RNU7-94P-201ENST00000459576 63 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 RNU6-191P-201ENST00000516295 94 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 MIR502-201ENST00000606349 86 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 AL773524.1-201ENST00000614065 229 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 AC018630.2-201ENST00000534866 2403 ntBASIC1.75□□□□□ -2.13
PCDH20Q8N6Y1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.74□□□□□ -2.13
PCDH20Q8N6Y1 Y_RNA.368-201ENST00000365547 113 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms