Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RNU6-326P-201ENST00000365480 107 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 Y_RNA.368-201ENST00000365547 113 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 Y_RNA.376-201ENST00000365638 108 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 RNU6-472P-201ENST00000384299 107 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 SNORD116-13-201ENST00000384408 92 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 Y_RNA.518-201ENST00000384552 113 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 RNU6-376P-201ENST00000384731 106 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 AL135790.2-201ENST00000437701 267 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 MTND3P2-201ENST00000438452 342 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 AL606517.2-201ENST00000442855 241 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 MTND4LP30-201ENST00000454092 297 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 RNU6-63P-201ENST00000516690 95 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 RNU1-40P-201ENST00000516816 164 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 RNU1-97P-201ENST00000516872 164 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 RNU2-31P-201ENST00000516954 155 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 RNU6-570P-201ENST00000517051 105 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 AC091178.2-201ENST00000584401 117 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 AC004832.4-201ENST00000608952 331 ntBASIC2.12□□□□□ -2.07
CCDC33Q8N5R6 Y_RNA.16-201ENST00000362421 102 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 Y_RNA.172-201ENST00000363765 102 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 Y_RNA.310-201ENST00000365063 113 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 U8.13-201ENST00000390842 128 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 RNU6-1248P-201ENST00000391096 64 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 SNORA53-201ENST00000391141 249 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 RNU6-855P-201ENST00000410395 104 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 RNU2-2P-201ENST00000410396 191 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 MTCO1P5-201ENST00000433573 344 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 AL162725.1-201ENST00000435405 301 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 RNA5SP57-201ENST00000459463 123 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 TRBVB-201ENST00000477100 408 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 AC015720.1-201ENST00000565251 277 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 MIR4448-201ENST00000584360 86 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 AL162730.1-201ENST00000605734 292 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 AP001282.2-201ENST00000616149 309 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 MIR6079-201ENST00000635807 62 ntBASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCDC33Q8N5R6 Y_RNA.456-201ENST00000384232 111 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 Y_RNA.461-201ENST00000384263 103 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 MIR568-201ENST00000385036 95 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 MT-TW-201ENST00000387382 68 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 RNA5SP109-201ENST00000391010 116 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 SNORA48.3-201ENST00000391081 134 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 RNA5SP511-201ENST00000410487 115 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 RPL23AP6-201ENST00000446637 472 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 RPS20P10-201ENST00000451209 253 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 AC091021.1-201ENST00000468051 388 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 RNA5SP458-201ENST00000516188 119 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 RNU6-191P-201ENST00000516295 94 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 RNU6-1338P-201ENST00000516328 91 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 RNA5SP481-201ENST00000516814 122 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 MIR4713-201ENST00000582691 75 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 AC002984.1-201ENST00000591692 448 ntBASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC33Q8N5R6 Y_RNA.140-201ENST00000363474 103 ntBASIC2.09□□□□□ -2.07
CCDC33Q8N5R6 MIR520G-201ENST00000385064 90 ntBASIC2.09□□□□□ -2.07
CCDC33Q8N5R6 MIR1302-6-201ENST00000408466 90 ntBASIC2.09□□□□□ -2.07
CCDC33Q8N5R6 CYCSP49-201ENST00000420810 319 ntBASIC2.09□□□□□ -2.07
CCDC33Q8N5R6 AC245047.3-201ENST00000429428 127 ntBASIC2.09□□□□□ -2.07
CCDC33Q8N5R6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC33Q8N5R6 RNU6-341P-201ENST00000516973 96 ntBASIC2.09□□□□□ -2.07
CCDC33Q8N5R6 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.09□□□□□ -2.07
CCDC33Q8N5R6 U6.104-201ENST00000637979 90 ntBASIC2.09□□□□□ -2.07
CCDC33Q8N5R6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CCDC33Q8N5R6 AC092881.1-201ENST00000638218 2733 ntBASIC2.09□□□□□ -2.08
CCDC33Q8N5R6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 Y_RNA.341-201ENST00000365341 102 ntBASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 Y_RNA.483-201ENST00000384380 101 ntBASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 MIR583-201ENST00000384846 75 ntBASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 snosnR66.1-201ENST00000391095 99 ntBASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 SNORA40.18-201ENST00000391200 128 ntBASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 RNU2-7P-201ENST00000410794 178 ntBASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 HSPE1P9-201ENST00000440046 311 ntBASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 SERF1AP1-201ENST00000514575 187 ntBASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 MIR5089-201ENST00000580047 84 ntBASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 AC037487.3-201ENST00000606668 112 ntBASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 MIR6845-201ENST00000613182 61 ntBASIC2.08□□□□□ -2.08
CCDC33Q8N5R6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC33Q8N5R6 MIR335-201ENST00000362173 94 ntBASIC2.07□□□□□ -2.08
CCDC33Q8N5R6 Y_RNA.396-201ENST00000383949 103 ntBASIC2.07□□□□□ -2.08
CCDC33Q8N5R6 MIR562-201ENST00000384894 95 ntBASIC2.07□□□□□ -2.08
CCDC33Q8N5R6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CCDC33Q8N5R6 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
CCDC33Q8N5R6 SNORA26.9-201ENST00000391322 122 ntBASIC2.07□□□□□ -2.08
CCDC33Q8N5R6 HSPE1P21-201ENST00000438283 308 ntBASIC2.07□□□□□ -2.08
CCDC33Q8N5R6 RPS4XP11-201ENST00000446897 772 ntBASIC2.07□□□□□ -2.08
CCDC33Q8N5R6 RNU6-1096P-201ENST00000517089 102 ntBASIC2.07□□□□□ -2.08
CCDC33Q8N5R6 AC136628.3-201ENST00000521868 290 ntBASIC2.07□□□□□ -2.08
CCDC33Q8N5R6 MIR3935-201ENST00000583472 104 ntBASIC2.07□□□□□ -2.08
CCDC33Q8N5R6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CCDC33Q8N5R6 SNORA25.1-201ENST00000362326 128 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 248 ms