Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 RNU7-99P-201ENST00000516271 62 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2□□□□□ -2.09
SCN4BQ8IWT1 AL096840.1-201ENST00000603287 93 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 7SK.10-201ENST00000621414 298 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 5S_rRNA.13-201ENST00000622298 123 ntBASIC2□□□□□ -2.09
SCN4BQ8IWT1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 RNU6-463P-201ENST00000384340 107 ntBASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 RNU6-855P-201ENST00000410395 104 ntBASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 AC069257.2-201ENST00000441819 155 ntBASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 AC090255.1-201ENST00000495779 349 ntBASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 SERF1AP1-201ENST00000514575 187 ntBASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 RNU7-128P-201ENST00000517247 62 ntBASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 DEFB108E-201ENST00000524692 240 ntBASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 AP001282.2-201ENST00000616149 309 ntBASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 U4.1-201ENST00000620349 87 ntBASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 U6.108-201ENST00000637764 58 ntBASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SCN4BQ8IWT1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 AL391987.6-201ENST00000305671 199 ntBASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 RNA5SP432-201ENST00000362480 116 ntBASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 RNU6-117P-201ENST00000365415 107 ntBASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 RNU6-376P-201ENST00000384731 106 ntBASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 HMGN2P38-201ENST00000423806 265 ntBASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 MTCO1P5-201ENST00000433573 344 ntBASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 RPS26P45-201ENST00000471748 340 ntBASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 AC079804.2-201ENST00000490376 200 ntBASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 RPL21P9-201ENST00000556149 474 ntBASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 SUB1P4-201ENST00000566062 339 ntBASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 AC073413.2-201ENST00000604332 360 ntBASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.98□□□□□ -2.09
SCN4BQ8IWT1 MIR335-201ENST00000362173 94 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 Y_RNA.237-201ENST00000364439 102 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 Y_RNA.288-201ENST00000364854 92 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 Y_RNA.452-201ENST00000384202 108 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 RNU4-52P-201ENST00000384209 138 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 Y_RNA.518-201ENST00000384552 113 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 SNORA26.9-201ENST00000391322 122 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 CYCSP49-201ENST00000420810 319 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 AC245047.4-201ENST00000433189 144 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 SCARNA24.2-201ENST00000516968 130 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 AC084364.2-201ENST00000546924 395 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 MIR4503-201ENST00000582187 83 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 MIR4769-201ENST00000584126 77 ntBASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
SCN4BQ8IWT1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.09
SCN4BQ8IWT1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 RNA5SP99-201ENST00000364020 114 ntBASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 RNU6-702P-201ENST00000364982 107 ntBASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 Y_RNA.341-201ENST00000365341 102 ntBASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 Y_RNA.368-201ENST00000365547 113 ntBASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 AL163195.1-201ENST00000496941 348 ntBASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 RNU6-191P-201ENST00000516295 94 ntBASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 RNU6-63P-201ENST00000516690 95 ntBASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 MIR4713-201ENST00000582691 75 ntBASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 MIR3149-201ENST00000584629 83 ntBASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 AL512605.2-201ENST00000592972 256 ntBASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SCN4BQ8IWT1 Y_RNA.456-201ENST00000384232 111 ntBASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 RNU6-574P-201ENST00000384265 107 ntBASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 SNORD116-13-201ENST00000384408 92 ntBASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 MIR520A-201ENST00000384862 85 ntBASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 HMGN2P23-201ENST00000456759 269 ntBASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 RNU7-94P-201ENST00000459576 63 ntBASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 AC091959.1-201ENST00000495857 238 ntBASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 Y_RNA.668-201ENST00000516233 93 ntBASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 AC004832.4-201ENST00000608952 331 ntBASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 AP000553.5-201ENST00000641933 54 ntBASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SCN4BQ8IWT1 AC018630.2-201ENST00000534866 2403 ntBASIC1.94□□□□□ -2.1
SCN4BQ8IWT1 RNU6-112P-201ENST00000363599 104 ntBASIC1.94□□□□□ -2.1
SCN4BQ8IWT1 Y_RNA.310-201ENST00000365063 113 ntBASIC1.94□□□□□ -2.1
SCN4BQ8IWT1 RNA5SP100-201ENST00000410903 110 ntBASIC1.94□□□□□ -2.1
SCN4BQ8IWT1 RNA5SP59-201ENST00000410922 110 ntBASIC1.94□□□□□ -2.1
SCN4BQ8IWT1 RPS20P10-201ENST00000451209 253 ntBASIC1.94□□□□□ -2.1
SCN4BQ8IWT1 RPL36AP21-201ENST00000490372 323 ntBASIC1.94□□□□□ -2.1
SCN4BQ8IWT1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.94□□□□□ -2.1
SCN4BQ8IWT1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.94□□□□□ -2.1
SCN4BQ8IWT1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.94□□□□□ -2.1
SCN4BQ8IWT1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SCN4BQ8IWT1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 Y_RNA.193-201ENST00000363979 102 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 RNU4-13P-201ENST00000364019 141 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 SNORA63D-201ENST00000364359 132 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 MIR520G-201ENST00000385064 90 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 MIR9-3-201ENST00000385084 90 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 AC009310.1-201ENST00000414414 451 ntBASIC1.93□□□□□ -2.1
SCN4BQ8IWT1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms