Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 Y_RNA.172-201ENST00000363765 102 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 RNU6-682P-201ENST00000363843 106 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 RNU6-899P-201ENST00000363947 107 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 Y_RNA.270-201ENST00000364693 104 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 U8.13-201ENST00000390842 128 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 SNORA40.19-201ENST00000390846 128 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 AC009238.1-201ENST00000442165 424 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 AC009237.6-201ENST00000446969 424 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 RPS20P10-201ENST00000451209 253 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 SNORA4.4-201ENST00000515921 135 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 RNA5SP20-201ENST00000515976 84 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 RNY3P16-201ENST00000516338 101 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 RNU6-1337P-201ENST00000516525 95 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 AC100767.1-201ENST00000528178 123 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 MIR4308-201ENST00000580634 81 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 MIR4524B-201ENST00000581569 115 ntBASIC2.51□□□□□ -2.01
UBE3BQ7Z3V4 CENPCP1-201ENST00000533085 2578 ntBASIC2.5□□□□□ -2.01
UBE3BQ7Z3V4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.5□□□□□ -2.01
UBE3BQ7Z3V4 Y_RNA.150-201ENST00000363562 102 ntBASIC2.5□□□□□ -2.01
UBE3BQ7Z3V4 Y_RNA.308-201ENST00000365043 101 ntBASIC2.5□□□□□ -2.01
UBE3BQ7Z3V4 RNU6-1062P-201ENST00000383908 107 ntBASIC2.5□□□□□ -2.01
UBE3BQ7Z3V4 AC104332.1-201ENST00000440471 797 ntBASIC2.5□□□□□ -2.01
UBE3BQ7Z3V4 snoU13.23-201ENST00000458863 104 ntBASIC2.5□□□□□ -2.01
UBE3BQ7Z3V4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.5□□□□□ -2.01
UBE3BQ7Z3V4 HMGB3P3-201ENST00000510526 400 ntBASIC2.5□□□□□ -2.01
UBE3BQ7Z3V4 MIR5089-201ENST00000580047 84 ntBASIC2.5□□□□□ -2.01
UBE3BQ7Z3V4 AC068700.1-201ENST00000565862 3754 ntBASIC2.5□□□□□ -2.01
UBE3BQ7Z3V4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
UBE3BQ7Z3V4 RNU6-1048P-201ENST00000364054 107 ntBASIC2.49□□□□□ -2.01
UBE3BQ7Z3V4 RNU6-923P-201ENST00000364753 107 ntBASIC2.49□□□□□ -2.01
UBE3BQ7Z3V4 RNU6-117P-201ENST00000365415 107 ntBASIC2.49□□□□□ -2.01
UBE3BQ7Z3V4 COX6CP10-201ENST00000416832 224 ntBASIC2.49□□□□□ -2.01
UBE3BQ7Z3V4 AC010154.1-201ENST00000425857 269 ntBASIC2.49□□□□□ -2.01
UBE3BQ7Z3V4 RNU7-141P-201ENST00000459304 62 ntBASIC2.49□□□□□ -2.01
UBE3BQ7Z3V4 SUMO2P18-201ENST00000518873 252 ntBASIC2.49□□□□□ -2.01
UBE3BQ7Z3V4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.49□□□□□ -2.01
UBE3BQ7Z3V4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.49□□□□□ -2.01
UBE3BQ7Z3V4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.49□□□□□ -2.01
UBE3BQ7Z3V4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
UBE3BQ7Z3V4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 Y_RNA.233-201ENST00000364407 101 ntBASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 RNA5SP160-201ENST00000364866 120 ntBASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 RNU6-407P-201ENST00000365280 104 ntBASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 SNORD116-13-201ENST00000384408 92 ntBASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 RNU6-493P-201ENST00000391321 108 ntBASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 AC060773.1-201ENST00000421698 310 ntBASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 AL353689.1-201ENST00000438895 199 ntBASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 RNU1-131P-201ENST00000458943 161 ntBASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 AC004832.4-201ENST00000608952 331 ntBASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 U6.106-201ENST00000636360 105 ntBASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
UBE3BQ7Z3V4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 RNU6-1323P-201ENST00000384025 107 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 MIR144-201ENST00000384886 86 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 MTCO2P33-201ENST00000402100 465 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 EDDM3CP-201ENST00000415977 425 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 RNA5SP82-201ENST00000516707 92 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 RNU6-861P-201ENST00000516745 106 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 AC022559.1-201ENST00000520905 205 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 MIR5688-201ENST00000580619 83 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 SNORD14A-201ENST00000606526 91 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 AL353149.1-201ENST00000610667 244 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 MIR6845-201ENST00000613182 61 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 AC245884.12-201ENST00000615364 59 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 AC134026.1-201ENST00000623249 2239 ntBASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
UBE3BQ7Z3V4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.46□□□□□ -2.01
UBE3BQ7Z3V4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.01
UBE3BQ7Z3V4 ZNF355P-201ENST00000427301 3216 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 RNU1-22P-201ENST00000363334 158 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 Y_RNA.240-201ENST00000364469 95 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 RNU4-17P-201ENST00000365598 141 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 RNU6-144P-201ENST00000383951 107 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 Y_RNA.464-201ENST00000384282 110 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 MIR524-201ENST00000385242 87 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 MIR526A2-201ENST00000390198 65 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 MIR1262-201ENST00000408276 93 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 RNU7-115P-201ENST00000516433 55 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 AC027419.1-201ENST00000522976 328 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 AC015712.3-201ENST00000559380 164 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 DEFB122-202ENST00000569013 197 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 MIR4769-201ENST00000584126 77 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 AP003357.1-201ENST00000604497 148 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 MIR548AY-201ENST00000617669 107 ntBASIC2.46□□□□□ -2.02
UBE3BQ7Z3V4 Y_RNA.121-201ENST00000363309 113 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 237.1 ms