Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 MIR3910-1-201ENST00000580936 111 ntBASIC2.97□□□□□ -1.93
RUFY4Q6ZNE9 Z82195.2-201ENST00000612348 18351 ntBASIC2.97□□□□□ -1.93
RUFY4Q6ZNE9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.93
RUFY4Q6ZNE9 Y_RNA.8-201ENST00000362353 102 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 RNU6-187P-201ENST00000384139 106 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 Y_RNA.572-201ENST00000384757 98 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 RN7SKP101-201ENST00000411376 320 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 RPS15AP28-201ENST00000435088 386 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 TMSB4XP3-201ENST00000445144 114 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 AC245047.8-201ENST00000456455 284 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 AC107027.2-201ENST00000512197 115 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 RNU6-453P-201ENST00000516819 85 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 MTND5P41-201ENST00000517498 206 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 AC004486.1-201ENST00000546846 233 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 MIR3670-2-201ENST00000582974 65 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 MIR3605-201ENST00000583214 100 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 MIR3670-1-201ENST00000584160 65 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 MIR3670-3-201ENST00000584855 65 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 MIR3670-4-201ENST00000612260 65 ntBASIC2.96□□□□□ -1.94
RUFY4Q6ZNE9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 RNU6-728P-201ENST00000365375 104 ntBASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 AL606845.1-201ENST00000404881 255 ntBASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 RNU6-383P-201ENST00000410864 94 ntBASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 AC096725.1-201ENST00000514266 313 ntBASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 AL359075.3-201ENST00000613288 217 ntBASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 MIR338-201ENST00000636369 67 ntBASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RUFY4Q6ZNE9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
RUFY4Q6ZNE9 MIR26A1-201ENST00000362205 77 ntBASIC2.94□□□□□ -1.94
RUFY4Q6ZNE9 SNORD116-18-201ENST00000383961 92 ntBASIC2.94□□□□□ -1.94
RUFY4Q6ZNE9 MIR562-201ENST00000384894 95 ntBASIC2.94□□□□□ -1.94
RUFY4Q6ZNE9 MIR1278-201ENST00000408753 81 ntBASIC2.94□□□□□ -1.94
RUFY4Q6ZNE9 RNU4-43P-201ENST00000410628 137 ntBASIC2.94□□□□□ -1.94
RUFY4Q6ZNE9 RNU2-55P-201ENST00000411146 174 ntBASIC2.94□□□□□ -1.94
RUFY4Q6ZNE9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.94□□□□□ -1.94
RUFY4Q6ZNE9 RPS4XP11-201ENST00000446897 772 ntBASIC2.94□□□□□ -1.94
RUFY4Q6ZNE9 AC008413.1-201ENST00000511864 177 ntBASIC2.94□□□□□ -1.94
RUFY4Q6ZNE9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.94□□□□□ -1.94
RUFY4Q6ZNE9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 RNU4-41P-201ENST00000364426 143 ntBASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 Y_RNA.400-201ENST00000383963 111 ntBASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 SNORA67.4-201ENST00000384688 142 ntBASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 RNU6-417P-201ENST00000384712 107 ntBASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 RNU6-443P-201ENST00000384780 107 ntBASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 MIR1262-201ENST00000408276 93 ntBASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 AL121914.1-201ENST00000450188 156 ntBASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 AC024995.1-201ENST00000523014 93 ntBASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 CYCSP26-201ENST00000534107 320 ntBASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 AL021707.8-201ENST00000609428 183 ntBASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.93□□□□□ -1.94
RUFY4Q6ZNE9 AC100821.1-201ENST00000523153 2479 ntBASIC2.92□□□□□ -1.94
RUFY4Q6ZNE9 Y_RNA.203-201ENST00000364106 102 ntBASIC2.92□□□□□ -1.94
RUFY4Q6ZNE9 RNU6-704P-201ENST00000364162 103 ntBASIC2.92□□□□□ -1.94
RUFY4Q6ZNE9 Y_RNA.337-201ENST00000365312 102 ntBASIC2.92□□□□□ -1.94
RUFY4Q6ZNE9 MIR15B-201ENST00000385045 98 ntBASIC2.92□□□□□ -1.94
RUFY4Q6ZNE9 MIR29C-201ENST00000385231 88 ntBASIC2.92□□□□□ -1.94
RUFY4Q6ZNE9 UBBP3-201ENST00000445497 241 ntBASIC2.92□□□□□ -1.94
RUFY4Q6ZNE9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.92□□□□□ -1.94
RUFY4Q6ZNE9 AC011604.1-201ENST00000545978 196 ntBASIC2.92□□□□□ -1.94
RUFY4Q6ZNE9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.92□□□□□ -1.94
RUFY4Q6ZNE9 SNORD114-6-201ENST00000364393 72 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 RNU6-1130P-201ENST00000365434 107 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 MT-TT-201ENST00000387460 66 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 CST2P1-201ENST00000425770 87 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 AC023449.1-201ENST00000454464 154 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 RNU6-237P-201ENST00000515985 71 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 RNU6-1041P-201ENST00000516254 102 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 RNU1-142P-201ENST00000516682 145 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 AL358944.1-201ENST00000528537 144 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 AP001485.1-201ENST00000604799 199 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 Y_RNA.778-201ENST00000620203 90 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 AC012640.5-201ENST00000623897 319 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 AC064859.1-201ENST00000624741 174 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 U2.22-201ENST00000636441 106 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 AC132825.6-201ENST00000638861 357 ntBASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
RUFY4Q6ZNE9 AC018630.2-201ENST00000534866 2403 ntBASIC2.9□□□□□ -1.94
RUFY4Q6ZNE9 RNU6-643P-201ENST00000384018 107 ntBASIC2.9□□□□□ -1.95
RUFY4Q6ZNE9 RNU6-136P-201ENST00000384663 107 ntBASIC2.9□□□□□ -1.95
RUFY4Q6ZNE9 AL117342.1-201ENST00000404861 406 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 251.9 ms