Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 MIR22-201ENST00000362190 85 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 snoU2-30.2-201ENST00000362805 70 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 RNU1-96P-201ENST00000364163 162 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 Y_RNA.280-201ENST00000364765 112 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 RNU6-1138P-201ENST00000365359 106 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 MIR592-201ENST00000384959 97 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 RNA5SP467-201ENST00000391274 118 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 RNA5SP274-201ENST00000410484 108 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 Y_RNA.630-201ENST00000411370 108 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 RNU6-365P-201ENST00000517113 106 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 RNU1-104P-201ENST00000517280 175 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 MIR4662B-201ENST00000579498 81 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 AC108081.1-201ENST00000604358 221 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 AL136360.1-201ENST00000503377 1900 ntBASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF111Q6ZNA4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 MIR422A-201ENST00000362286 90 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 SNORA71.1-201ENST00000364523 117 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 RNU6-309P-201ENST00000364573 106 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 MIR483-201ENST00000385070 76 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 SNORA12.1-201ENST00000390873 148 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 RNU6-220P-201ENST00000390919 107 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 AL603914.1-201ENST00000401964 204 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 RPS15AP28-201ENST00000435088 386 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 AC006483.1-201ENST00000487308 313 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 NDUFA4P2-201ENST00000489989 244 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 AC008885.1-201ENST00000514930 301 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 SNORD33.1-201ENST00000516213 88 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 RNU7-99P-201ENST00000516271 62 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 SNORA74D-201ENST00000516404 141 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 AC007751.1-201ENST00000529260 376 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 AC007229.1-201ENST00000590455 412 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 AL162274.2-201ENST00000614406 332 ntBASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RNF111Q6ZNA4 AC245060.5-201ENST00000610778 3293 ntBASIC2.84□□□□□ -1.96
RNF111Q6ZNA4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RNF111Q6ZNA4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.84□□□□□ -1.96
RNF111Q6ZNA4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
RNF111Q6ZNA4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 Y_RNA.52-201ENST00000362760 96 ntBASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 Y_RNA.66-201ENST00000362862 102 ntBASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 MIR561-201ENST00000385216 97 ntBASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 SNRPGP10-201ENST00000432323 225 ntBASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 AC018868.1-201ENST00000491307 315 ntBASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 HMGN1P7-201ENST00000491722 313 ntBASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 MRPS17P9-201ENST00000511924 393 ntBASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 RNA5SP341-201ENST00000516261 117 ntBASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 RNU7-128P-201ENST00000517247 62 ntBASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 MIR3200-201ENST00000580767 85 ntBASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 U6.95-201ENST00000636931 70 ntBASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
RNF111Q6ZNA4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 MIR887-201ENST00000401258 79 ntBASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 RNA5SP127-201ENST00000411051 133 ntBASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 EDDM3CP-201ENST00000415977 425 ntBASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 AC096725.1-201ENST00000514266 313 ntBASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 RNU6-126P-201ENST00000516685 103 ntBASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 Y_RNA.709-201ENST00000516952 92 ntBASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 MIR3129-201ENST00000581095 76 ntBASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 MIR4325-201ENST00000583049 90 ntBASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 AC091178.2-201ENST00000584401 117 ntBASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 AC009487.2-201ENST00000420969 6821 ntBASIC2.82□□□□□ -1.96
RNF111Q6ZNA4 AL035425.3-201ENST00000564206 4996 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 RNA5SP125-201ENST00000364843 120 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 SNORA1-201ENST00000384107 130 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 SNORA54-201ENST00000384281 123 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 MIR624-201ENST00000385217 97 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 SNORD72-201ENST00000390994 80 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 RN7SKP220-201ENST00000410611 288 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 AC022018.1-201ENST00000430685 241 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 YWHAEP4-201ENST00000505390 198 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 RNU6-504P-201ENST00000516568 104 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 SCARNA13-201ENST00000516672 275 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 AL359075.3-201ENST00000613288 217 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 MIR338-201ENST00000636369 67 ntBASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RNF111Q6ZNA4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 SNORA33-201ENST00000363664 130 ntBASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 SNORA25.6-201ENST00000364121 118 ntBASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 SNORD58C-201ENST00000365223 64 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms