Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 AL359881.1-201ENST00000602916 267 ntBASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 AL049861.1-201ENST00000603130 150 ntBASIC3.35□□□□□ -1.87
PRPF40BQ6NWY9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 RNU1-23P-201ENST00000363361 144 ntBASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 RNU6-117P-201ENST00000365415 107 ntBASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 RNU6-460P-201ENST00000391158 108 ntBASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 AL590004.2-201ENST00000404787 371 ntBASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 RNU6-588P-201ENST00000410281 105 ntBASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 RNA5SP344-201ENST00000411081 104 ntBASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 Y_RNA.629-201ENST00000411368 105 ntBASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 SNORA48.11-201ENST00000517015 89 ntBASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 AP001328.1-201ENST00000528550 176 ntBASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 MIR2681-201ENST00000581814 105 ntBASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 AC012640.5-201ENST00000623897 319 ntBASIC3.34□□□□□ -1.87
PRPF40BQ6NWY9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
PRPF40BQ6NWY9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 Y_RNA.71-201ENST00000362892 104 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 RNU1-22P-201ENST00000363334 158 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 Y_RNA.127-201ENST00000363386 109 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 Y_RNA.261-201ENST00000364631 102 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 SNORD116-14-201ENST00000383894 92 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 SNORD116-17-201ENST00000383929 92 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 SNORD116-15-201ENST00000384445 92 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 SNORD116-19-201ENST00000384729 92 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 MIR95-201ENST00000385072 81 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 MIR1278-201ENST00000408753 81 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 AC123900.1-201ENST00000420390 96 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 AC003685.2-201ENST00000422795 395 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 snoU13.15-201ENST00000459407 104 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 AC092991.1-201ENST00000477176 376 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 MIR378D2-201ENST00000580636 98 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 MIR3616-201ENST00000584070 92 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 ZNF861P-201ENST00000588126 639 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 AL355297.2-201ENST00000604792 129 ntBASIC3.33□□□□□ -1.88
PRPF40BQ6NWY9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 RNA5SP289-201ENST00000362332 137 ntBASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 Y_RNA.218-201ENST00000364218 104 ntBASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 AL513477.1-202ENST00000417061 214 ntBASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 HMGN2P34-201ENST00000437647 269 ntBASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 SNRPGP8-201ENST00000454064 226 ntBASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 RNU7-197P-201ENST00000458836 62 ntBASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 RNU6-1299P-201ENST00000516316 100 ntBASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 RNU2-56P-201ENST00000516826 190 ntBASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 RPL23AP91-201ENST00000569211 455 ntBASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 AL929325.1-201ENST00000603096 117 ntBASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 AL356280.1-201ENST00000603614 379 ntBASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRPF40BQ6NWY9 Y_RNA.203-201ENST00000364106 102 ntBASIC3.31□□□□□ -1.88
PRPF40BQ6NWY9 RNA5SP205-201ENST00000364653 136 ntBASIC3.31□□□□□ -1.88
PRPF40BQ6NWY9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.31□□□□□ -1.88
PRPF40BQ6NWY9 MTCO1P44-201ENST00000441935 243 ntBASIC3.31□□□□□ -1.88
PRPF40BQ6NWY9 RNU6-197P-201ENST00000516680 100 ntBASIC3.31□□□□□ -1.88
PRPF40BQ6NWY9 RNU6-1234P-201ENST00000516877 103 ntBASIC3.31□□□□□ -1.88
PRPF40BQ6NWY9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF40BQ6NWY9 CTSLP2-204ENST00000629029 392 ntBASIC3.31□□□□□ -1.88
PRPF40BQ6NWY9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF40BQ6NWY9 AC092435.3-201ENST00000565538 3654 ntBASIC3.31□□□□□ -1.88
PRPF40BQ6NWY9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
PRPF40BQ6NWY9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 Y_RNA.621-201ENST00000411065 96 ntBASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 RNU2-55P-201ENST00000411146 174 ntBASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 AC245047.4-201ENST00000433189 144 ntBASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 RPS4XP11-201ENST00000446897 772 ntBASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 AC093259.1-201ENST00000509755 300 ntBASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 RNU6-1146P-201ENST00000516282 102 ntBASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 RNU6-856P-201ENST00000516959 98 ntBASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 MIR3605-201ENST00000583214 100 ntBASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 MIR3117-201ENST00000584034 78 ntBASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 AC120024.3-201ENST00000603167 156 ntBASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 AL021707.8-201ENST00000609428 183 ntBASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
PRPF40BQ6NWY9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.29□□□□□ -1.88
PRPF40BQ6NWY9 Y_RNA.81-201ENST00000362997 102 ntBASIC3.29□□□□□ -1.88
PRPF40BQ6NWY9 SNORA25.7-201ENST00000364375 127 ntBASIC3.29□□□□□ -1.88
PRPF40BQ6NWY9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PRPF40BQ6NWY9 RNU2-70P-201ENST00000410718 179 ntBASIC3.29□□□□□ -1.88
PRPF40BQ6NWY9 CYCSP49-201ENST00000420810 319 ntBASIC3.29□□□□□ -1.88
PRPF40BQ6NWY9 SNORA9.3-201ENST00000516383 129 ntBASIC3.29□□□□□ -1.88
PRPF40BQ6NWY9 AC007536.1-201ENST00000533382 349 ntBASIC3.29□□□□□ -1.88
PRPF40BQ6NWY9 AC011604.1-201ENST00000545978 196 ntBASIC3.29□□□□□ -1.88
PRPF40BQ6NWY9 U7.2-201ENST00000607576 63 ntBASIC3.29□□□□□ -1.88
PRPF40BQ6NWY9 JPX_2.1-201ENST00000614161 69 ntBASIC3.29□□□□□ -1.88
PRPF40BQ6NWY9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PRPF40BQ6NWY9 MIR26A1-201ENST00000362205 77 ntBASIC3.28□□□□□ -1.88
PRPF40BQ6NWY9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.28□□□□□ -1.88
PRPF40BQ6NWY9 RNU6-597P-201ENST00000365620 102 ntBASIC3.28□□□□□ -1.88
PRPF40BQ6NWY9 RNU6-80P-201ENST00000384195 107 ntBASIC3.28□□□□□ -1.88
PRPF40BQ6NWY9 MIR592-201ENST00000384959 97 ntBASIC3.28□□□□□ -1.88
PRPF40BQ6NWY9 RN7SKP192-201ENST00000411291 327 ntBASIC3.28□□□□□ -1.88
PRPF40BQ6NWY9 Z98742.3-201ENST00000418637 326 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms