Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC011604.1-201ENST00000545978 196 ntBASIC3.42□□□□□ -1.86
COL13A1Q5TAT6 AC091178.2-201ENST00000584401 117 ntBASIC3.42□□□□□ -1.86
COL13A1Q5TAT6 SNORA50A-202ENST00000629536 136 ntBASIC3.42□□□□□ -1.86
COL13A1Q5TAT6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
COL13A1Q5TAT6 AC110079.1-202ENST00000635213 138 ntBASIC3.42□□□□□ -1.86
COL13A1Q5TAT6 AC244205.2-202ENST00000635781 342 ntBASIC3.42□□□□□ -1.86
COL13A1Q5TAT6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL13A1Q5TAT6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 RNU6-1298P-201ENST00000362456 101 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 RNA5SP42-201ENST00000364278 115 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 SNORD114-30-201ENST00000364448 72 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 Y_RNA.309-201ENST00000365046 111 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 SNORD58C-201ENST00000365223 64 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 RNU6-546P-201ENST00000383991 107 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 MIR520G-201ENST00000385064 90 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 MIR548A3-201ENST00000385297 97 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 RNU4-53P-201ENST00000410828 140 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 RNA5SP127-201ENST00000411051 133 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 MTATP6P21-201ENST00000440681 189 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 SNORA4.4-201ENST00000515921 135 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 RNU7-149P-201ENST00000516739 59 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 AL365205.2-201ENST00000594586 68 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 AC108081.1-201ENST00000604358 221 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 JPX_2.1-201ENST00000614161 69 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 Pinc.1-201ENST00000616452 154 ntBASIC3.41□□□□□ -1.86
COL13A1Q5TAT6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.4□□□□□ -1.86
COL13A1Q5TAT6 Y_RNA.346-201ENST00000365385 112 ntBASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 MTCO1P44-201ENST00000441935 243 ntBASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 RPS26P45-201ENST00000471748 340 ntBASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 SNORD33.1-201ENST00000516213 88 ntBASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 SCARNA3-201ENST00000517097 143 ntBASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 RNU6-365P-201ENST00000517113 106 ntBASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 RNA5SP170-201ENST00000517150 101 ntBASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 uc_338.1-201ENST00000612113 180 ntBASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 MIR5739-201ENST00000619803 80 ntBASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.4□□□□□ -1.87
COL13A1Q5TAT6 AL355596.1-201ENST00000565399 3996 ntBASIC3.39□□□□□ -1.87
COL13A1Q5TAT6 SNORD116-21-201ENST00000384507 92 ntBASIC3.39□□□□□ -1.87
COL13A1Q5TAT6 RNU6-851P-201ENST00000384565 107 ntBASIC3.39□□□□□ -1.87
COL13A1Q5TAT6 RNU1-104P-201ENST00000517280 175 ntBASIC3.39□□□□□ -1.87
COL13A1Q5TAT6 MIR3117-201ENST00000584034 78 ntBASIC3.39□□□□□ -1.87
COL13A1Q5TAT6 U6.73-201ENST00000619194 103 ntBASIC3.39□□□□□ -1.87
COL13A1Q5TAT6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.39□□□□□ -1.87
COL13A1Q5TAT6 MIR1248-201ENST00000629190 106 ntBASIC3.39□□□□□ -1.87
COL13A1Q5TAT6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.39□□□□□ -1.87
COL13A1Q5TAT6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 Y_RNA.242-201ENST00000364473 110 ntBASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 SNORA25.9-201ENST00000365087 128 ntBASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 MIR891A-201ENST00000401237 79 ntBASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 MIR1253-201ENST00000408273 105 ntBASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 CYP2C59P-201ENST00000457790 269 ntBASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 RNU6-1146P-201ENST00000516282 102 ntBASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 RNU6-504P-201ENST00000516568 104 ntBASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 RNU6-856P-201ENST00000516959 98 ntBASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 RNU2-60P-201ENST00000517290 128 ntBASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.38□□□□□ -1.87
COL13A1Q5TAT6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 MIR337-201ENST00000362281 93 ntBASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 RNU6-147P-201ENST00000383983 107 ntBASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 RNU2-32P-201ENST00000411193 191 ntBASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 Y_RNA.630-201ENST00000411370 108 ntBASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 AC123900.1-201ENST00000420390 96 ntBASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 RN7SKP19-201ENST00000516016 252 ntBASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 RNU6-965P-201ENST00000516721 96 ntBASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 AL121890.5-201ENST00000620848 304 ntBASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 MTND5P32-201ENST00000560711 1802 ntBASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.37□□□□□ -1.87
COL13A1Q5TAT6 Y_RNA.52-201ENST00000362760 96 ntBASIC3.36□□□□□ -1.87
COL13A1Q5TAT6 RNU6-880P-201ENST00000384526 107 ntBASIC3.36□□□□□ -1.87
COL13A1Q5TAT6 MIR95-201ENST00000385072 81 ntBASIC3.36□□□□□ -1.87
COL13A1Q5TAT6 MIRLET7F2-201ENST00000385277 83 ntBASIC3.36□□□□□ -1.87
COL13A1Q5TAT6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
COL13A1Q5TAT6 RNA5SP229-201ENST00000410809 99 ntBASIC3.36□□□□□ -1.87
COL13A1Q5TAT6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.36□□□□□ -1.87
COL13A1Q5TAT6 AC018634.1-201ENST00000437554 401 ntBASIC3.36□□□□□ -1.87
COL13A1Q5TAT6 AC093259.1-201ENST00000509755 300 ntBASIC3.36□□□□□ -1.87
COL13A1Q5TAT6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL13A1Q5TAT6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.36□□□□□ -1.87
COL13A1Q5TAT6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL13A1Q5TAT6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 Y_RNA.66-201ENST00000362862 102 ntBASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 RNU6-309P-201ENST00000364573 106 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms