Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 AL451046.2-201ENST00000403074 277 ntBASIC1.56□□□□□ -2.16
ALFQ53S48 RNU4-62P-201ENST00000410125 130 ntBASIC1.56□□□□□ -2.16
ALFQ53S48 RNU2-61P-201ENST00000411069 191 ntBASIC1.56□□□□□ -2.16
ALFQ53S48 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.56□□□□□ -2.16
ALFQ53S48 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.56□□□□□ -2.16
ALFQ53S48 RPS4XP11-201ENST00000446897 772 ntBASIC1.56□□□□□ -2.16
ALFQ53S48 AC022441.3-201ENST00000605737 136 ntBASIC1.56□□□□□ -2.16
ALFQ53S48 AC091925.1-201ENST00000623204 462 ntBASIC1.56□□□□□ -2.16
ALFQ53S48 AC068647.2-201ENST00000637380 353 ntBASIC1.56□□□□□ -2.16
ALFQ53S48 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.55□□□□□ -2.16
ALFQ53S48 Y_RNA.140-201ENST00000363474 103 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 RNU4-41P-201ENST00000364426 143 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 SNORA25.8-201ENST00000364831 128 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 RNU6-1175P-201ENST00000365200 107 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 Y_RNA.496-201ENST00000384444 101 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 RNU6-1105P-201ENST00000384774 107 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 RNU6-1199P-201ENST00000411249 104 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 AF228730.4-201ENST00000421457 183 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.55□□□□□ -2.16
ALFQ53S48 AL160004.2-201ENST00000432935 350 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 RPEP5-201ENST00000441137 268 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 AC005042.3-201ENST00000453230 174 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 AL117351.2-201ENST00000513571 157 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 RNU6-436P-201ENST00000516171 114 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 Y_RNA.675-201ENST00000516389 149 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 AC090049.2-201ENST00000550377 109 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 AP001094.1-201ENST00000579805 193 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 GHRLOS.1-201ENST00000610995 70 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 AC104985.2-201ENST00000620598 500 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 AL606534.2-204ENST00000635008 178 ntBASIC1.55□□□□□ -2.16
ALFQ53S48 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.55□□□□□ -2.16
ALFQ53S48 RNU4-73P-201ENST00000363164 141 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 Y_RNA.526-201ENST00000384572 110 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 MIR653-201ENST00000385279 96 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 SNORA67.6-201ENST00000391093 99 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 AL390729.2-201ENST00000416137 156 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 AC093850.1-201ENST00000454121 251 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 SNORA40.14-201ENST00000516543 86 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 AC022616.4-201ENST00000522985 181 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 MIR4795-201ENST00000584182 89 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 AP000942.3-201ENST00000603702 160 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 AC010205.1-201ENST00000616668 449 ntBASIC1.54□□□□□ -2.16
ALFQ53S48 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
ALFQ53S48 RNA5SP327-201ENST00000362494 101 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 SNORD68-201ENST00000363214 84 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 Y_RNA.315-201ENST00000365117 102 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 SNORA2.2-201ENST00000365473 135 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
ALFQ53S48 RNU6-1080P-201ENST00000383982 107 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 RNU6-163P-201ENST00000384396 106 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 SNORD116-13-201ENST00000384408 92 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 Y_RNA.570-201ENST00000384750 101 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 MIR891A-201ENST00000401237 79 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 RNU6-710P-201ENST00000410424 105 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 Z98949.2-201ENST00000440996 144 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 DYNLT3P2-201ENST00000442517 295 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 RNU4-77P-201ENST00000516692 156 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ALFQ53S48 AC011604.1-201ENST00000545978 196 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 MIR5188-201ENST00000583467 113 ntBASIC1.53□□□□□ -2.16
ALFQ53S48 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ALFQ53S48 MIRLET7C-201ENST00000362160 84 ntBASIC1.52□□□□□ -2.17
ALFQ53S48 Y_RNA.5-201ENST00000362334 102 ntBASIC1.52□□□□□ -2.17
ALFQ53S48 RPL23AP36-201ENST00000413895 458 ntBASIC1.52□□□□□ -2.17
ALFQ53S48 AL354695.1-201ENST00000427935 228 ntBASIC1.52□□□□□ -2.17
ALFQ53S48 CYCTP-201ENST00000504253 315 ntBASIC1.52□□□□□ -2.17
ALFQ53S48 AL160236.1-201ENST00000556317 195 ntBASIC1.52□□□□□ -2.17
ALFQ53S48 AL357312.1-201ENST00000603879 298 ntBASIC1.52□□□□□ -2.17
ALFQ53S48 AL121655.1-201ENST00000605811 308 ntBASIC1.52□□□□□ -2.17
ALFQ53S48 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ALFQ53S48 Y_RNA.462-201ENST00000384268 102 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 Y_RNA.579-201ENST00000390939 94 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 AC022028.1-201ENST00000412054 408 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 MCFD2P1-201ENST00000417812 300 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 RNU6-917P-201ENST00000516294 104 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 Y_RNA.713-201ENST00000517013 96 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 RNU6-165P-201ENST00000517170 99 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 SNORA31.24-201ENST00000517232 57 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.51□□□□□ -2.17
ALFQ53S48 AL117336.2-201ENST00000602435 335 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 AC120024.3-201ENST00000603167 156 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 AC004832.4-201ENST00000608952 331 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.51□□□□□ -2.17
ALFQ53S48 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
ALFQ53S48 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
ALFQ53S48 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
ALFQ53S48 RNU4-79P-201ENST00000362764 141 ntBASIC1.5□□□□□ -2.17
ALFQ53S48 RNU6-833P-201ENST00000363486 107 ntBASIC1.5□□□□□ -2.17
ALFQ53S48 Y_RNA.197-201ENST00000364004 102 ntBASIC1.5□□□□□ -2.17
ALFQ53S48 Y_RNA.329-201ENST00000365209 107 ntBASIC1.5□□□□□ -2.17
ALFQ53S48 AC024067.1-201ENST00000426199 223 ntBASIC1.5□□□□□ -2.17
ALFQ53S48 AL603825.1-201ENST00000438481 80 ntBASIC1.5□□□□□ -2.17
ALFQ53S48 AC104332.1-201ENST00000440471 797 ntBASIC1.5□□□□□ -2.17
ALFQ53S48 RPL39P39-201ENST00000455840 151 ntBASIC1.5□□□□□ -2.17
ALFQ53S48 RNU6-1170P-201ENST00000515974 106 ntBASIC1.5□□□□□ -2.17
ALFQ53S48 RNU6-966P-201ENST00000516479 104 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms