Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 Y_RNA.243-201ENST00000364481 109 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 Y_RNA.398-201ENST00000383952 99 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 RNU6-1248P-201ENST00000391096 64 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 RNU2-2P-201ENST00000410396 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 RNU5E-9P-201ENST00000411164 104 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 RNU6-856P-201ENST00000516959 98 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 RNU6-548P-201ENST00000517083 115 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 SUMO2P18-201ENST00000518873 252 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 AC009127.3-201ENST00000570531 403 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 MIR5692C2-201ENST00000577959 77 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 RNU2-4P-201ENST00000606190 192 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 U2.15-201ENST00000611544 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 U2.16-201ENST00000613119 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 U2.12-201ENST00000613778 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 U2.9-201ENST00000615427 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 U2.11-201ENST00000616345 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 U2.2-201ENST00000616535 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 U2.3-201ENST00000617785 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 U2.19-201ENST00000618602 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 RNU2-1-201ENST00000618664 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 U2.6-201ENST00000619225 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 U2.5-201ENST00000619465 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 U2.10-201ENST00000620268 191 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 MIR6873-201ENST00000622788 63 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 U6.115-201ENST00000636045 103 ntBASIC2.45□□□□□ -2.02
SLC44A4Q53GD3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 SNORA3A-201ENST00000364113 130 ntBASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 Y_RNA.435-201ENST00000384095 112 ntBASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 RNU1-52P-201ENST00000384190 164 ntBASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 RNU6-160P-201ENST00000384591 107 ntBASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 Y_RNA.571-201ENST00000384753 98 ntBASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 AC060773.1-201ENST00000421698 310 ntBASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 BX510359.4-201ENST00000423750 193 ntBASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 RNU7-200P-201ENST00000516105 62 ntBASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 AC136628.3-201ENST00000521868 290 ntBASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 AC016717.2-201ENST00000609089 5141 ntBASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SLC44A4Q53GD3 Y_RNA.238-201ENST00000364441 102 ntBASIC2.43□□□□□ -2.02
SLC44A4Q53GD3 AL355796.1-201ENST00000406706 323 ntBASIC2.43□□□□□ -2.02
SLC44A4Q53GD3 AL606753.1-201ENST00000427435 87 ntBASIC2.43□□□□□ -2.02
SLC44A4Q53GD3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.43□□□□□ -2.02
SLC44A4Q53GD3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.43□□□□□ -2.02
SLC44A4Q53GD3 RNU2-34P-201ENST00000516534 121 ntBASIC2.43□□□□□ -2.02
SLC44A4Q53GD3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.43□□□□□ -2.02
SLC44A4Q53GD3 MIR5092-201ENST00000583139 88 ntBASIC2.43□□□□□ -2.02
SLC44A4Q53GD3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SLC44A4Q53GD3 AL159152.1-201ENST00000635019 2587 ntBASIC2.43□□□□□ -2.02
SLC44A4Q53GD3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.43□□□□□ -2.02
SLC44A4Q53GD3 AC245060.5-201ENST00000610778 3293 ntBASIC2.43□□□□□ -2.02
SLC44A4Q53GD3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SLC44A4Q53GD3 Y_RNA.124-201ENST00000363339 93 ntBASIC2.42□□□□□ -2.02
SLC44A4Q53GD3 RNA5SP493-201ENST00000364115 91 ntBASIC2.42□□□□□ -2.02
SLC44A4Q53GD3 SNORA20B-201ENST00000384220 132 ntBASIC2.42□□□□□ -2.02
SLC44A4Q53GD3 Y_RNA.572-201ENST00000384757 98 ntBASIC2.42□□□□□ -2.02
SLC44A4Q53GD3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.42□□□□□ -2.02
SLC44A4Q53GD3 SNORD65B-201ENST00000459126 73 ntBASIC2.42□□□□□ -2.02
SLC44A4Q53GD3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.42□□□□□ -2.02
SLC44A4Q53GD3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.42□□□□□ -2.02
SLC44A4Q53GD3 AL353997.5-201ENST00000618886 171 ntBASIC2.42□□□□□ -2.02
SLC44A4Q53GD3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.42□□□□□ -2.02
SLC44A4Q53GD3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 Y_RNA.7-201ENST00000362352 102 ntBASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 RNU6-23P-201ENST00000363283 107 ntBASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 Y_RNA.172-201ENST00000363765 102 ntBASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 RNU6-1130P-201ENST00000365434 107 ntBASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 Y_RNA.412-201ENST00000384001 104 ntBASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 MIR597-201ENST00000384968 97 ntBASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 RNU6-855P-201ENST00000410395 104 ntBASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 AC013791.1-201ENST00000616619 62 ntBASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SLC44A4Q53GD3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.02
SLC44A4Q53GD3 Y_RNA.182-201ENST00000363880 111 ntBASIC2.4□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.293-201ENST00000364908 93 ntBASIC2.4□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.341-201ENST00000365341 102 ntBASIC2.4□□□□□ -2.03
SLC44A4Q53GD3 RNU4-17P-201ENST00000365598 141 ntBASIC2.4□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.441-201ENST00000384123 112 ntBASIC2.4□□□□□ -2.03
SLC44A4Q53GD3 AC008134.1-201ENST00000420943 193 ntBASIC2.4□□□□□ -2.03
SLC44A4Q53GD3 AC011406.1-201ENST00000512440 370 ntBASIC2.4□□□□□ -2.03
SLC44A4Q53GD3 RNA5SP137-201ENST00000516833 135 ntBASIC2.4□□□□□ -2.03
SLC44A4Q53GD3 AC100767.1-201ENST00000528178 123 ntBASIC2.4□□□□□ -2.03
SLC44A4Q53GD3 MIR3169-201ENST00000578032 83 ntBASIC2.4□□□□□ -2.03
SLC44A4Q53GD3 AC004832.4-201ENST00000608952 331 ntBASIC2.4□□□□□ -2.03
SLC44A4Q53GD3 MIR6840-201ENST00000611937 71 ntBASIC2.4□□□□□ -2.03
SLC44A4Q53GD3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 snoU2_19.4-201ENST00000364329 80 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.272-201ENST00000364696 102 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.310-201ENST00000365063 113 ntBASIC2.39□□□□□ -2.03
SLC44A4Q53GD3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 197.3 ms