Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 MIR548O-201ENST00000408583 114 ntBASIC3.6□□□□□ -1.83
TMEM259Q4ZIN3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.6□□□□□ -1.83
TMEM259Q4ZIN3 AC245047.3-201ENST00000429428 127 ntBASIC3.6□□□□□ -1.83
TMEM259Q4ZIN3 AC099677.2-201ENST00000436385 175 ntBASIC3.6□□□□□ -1.83
TMEM259Q4ZIN3 RN7SL442P-201ENST00000473804 320 ntBASIC3.6□□□□□ -1.83
TMEM259Q4ZIN3 AC134878.1-201ENST00000619901 243 ntBASIC3.6□□□□□ -1.83
TMEM259Q4ZIN3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.6□□□□□ -1.83
TMEM259Q4ZIN3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TMEM259Q4ZIN3 MAPK10-362ENST00000641864 4484 ntBASIC3.6□□□□□ -1.83
TMEM259Q4ZIN3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TMEM259Q4ZIN3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TMEM259Q4ZIN3 MIRLET7F2-201ENST00000385277 83 ntBASIC3.59□□□□□ -1.83
TMEM259Q4ZIN3 AC092427.1-202ENST00000430569 476 ntBASIC3.59□□□□□ -1.83
TMEM259Q4ZIN3 Z96811.1-201ENST00000445880 108 ntBASIC3.59□□□□□ -1.83
TMEM259Q4ZIN3 AC092185.1-201ENST00000491371 97 ntBASIC3.59□□□□□ -1.83
TMEM259Q4ZIN3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.59□□□□□ -1.83
TMEM259Q4ZIN3 SNORA70.18-201ENST00000516696 98 ntBASIC3.59□□□□□ -1.83
TMEM259Q4ZIN3 SNORA70.19-201ENST00000516717 90 ntBASIC3.59□□□□□ -1.83
TMEM259Q4ZIN3 AC007179.3-201ENST00000604976 235 ntBASIC3.59□□□□□ -1.83
TMEM259Q4ZIN3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.59□□□□□ -1.83
TMEM259Q4ZIN3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.59□□□□□ -1.83
TMEM259Q4ZIN3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.59□□□□□ -1.83
TMEM259Q4ZIN3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
TMEM259Q4ZIN3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TMEM259Q4ZIN3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 RNA5SP72-201ENST00000364442 117 ntBASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 RNU1-91P-201ENST00000364746 163 ntBASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 RNU6-880P-201ENST00000384526 107 ntBASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 MIR490-201ENST00000384865 128 ntBASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 RNA5SP482-201ENST00000391269 118 ntBASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 SNORD45.4-201ENST00000516629 73 ntBASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 RNU6-113P-201ENST00000516653 101 ntBASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 IGKV1-22-201ENST00000524313 326 ntBASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TMEM259Q4ZIN3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 Y_RNA.528-201ENST00000384575 108 ntBASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 AC107083.1-201ENST00000439643 279 ntBASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 RNA5SP380-201ENST00000517190 98 ntBASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 MIR4762-201ENST00000585261 75 ntBASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 MIR7851-201ENST00000610611 160 ntBASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 AC006441.5-201ENST00000612680 209 ntBASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 AC022202.1-201ENST00000613515 211 ntBASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 AC073346.2-201ENST00000624724 2058 ntBASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 AC092435.3-201ENST00000565538 3654 ntBASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM259Q4ZIN3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 AP006437.1-201ENST00000641440 3685 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 U8.5-201ENST00000364528 136 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 SNORA2.2-201ENST00000365473 135 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 RNU6-1189P-201ENST00000383958 107 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 Y_RNA.410-201ENST00000383992 113 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 RNA5SP109-201ENST00000391010 116 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 SNORA11.1-201ENST00000408133 129 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 RNY4P30-201ENST00000410216 95 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 RNU7-25P-201ENST00000516544 62 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 RNU6-579P-201ENST00000516879 102 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 SCARNA15-202ENST00000516881 127 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 MIR5197-201ENST00000583721 112 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 uc_338.28-201ENST00000612082 187 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 AL137067.1-201ENST00000615933 120 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 SNORA50A-202ENST00000629536 136 ntBASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TMEM259Q4ZIN3 RNU6-268P-201ENST00000364174 107 ntBASIC3.55□□□□□ -1.84
TMEM259Q4ZIN3 AL606517.2-201ENST00000442855 241 ntBASIC3.55□□□□□ -1.84
TMEM259Q4ZIN3 RNU7-28P-201ENST00000516759 62 ntBASIC3.55□□□□□ -1.84
TMEM259Q4ZIN3 MIR3126-201ENST00000577443 74 ntBASIC3.55□□□□□ -1.84
TMEM259Q4ZIN3 AP003355.3-201ENST00000623465 114 ntBASIC3.55□□□□□ -1.84
TMEM259Q4ZIN3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM259Q4ZIN3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM259Q4ZIN3 RNA5SP50-201ENST00000363731 107 ntBASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 SNORD115-28-201ENST00000363931 81 ntBASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 RNU1-33P-201ENST00000364249 162 ntBASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 Y_RNA.495-201ENST00000384435 112 ntBASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 SNORA80E-201ENST00000384744 137 ntBASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 RNVU1-14-201ENST00000384770 164 ntBASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 RNU7-70P-201ENST00000516941 66 ntBASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 MIR376A2-201ENST00000636782 80 ntBASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 AC008264.2-201ENST00000610193 3731 ntBASIC3.54□□□□□ -1.84
TMEM259Q4ZIN3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.53□□□□□ -1.84
TMEM259Q4ZIN3 RNU1-58P-201ENST00000362413 163 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms