Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RNU6-136P-201ENST00000384663 107 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 RNU6-376P-201ENST00000384731 106 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 RNA5SP109-201ENST00000391010 116 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 RNU4-62P-201ENST00000410125 130 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.8□□□□□ -2.12
USP41Q3LFD5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.8□□□□□ -2.12
USP41Q3LFD5 RNU6-63P-201ENST00000516690 95 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 Y_RNA.720-201ENST00000517166 92 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 RNA5SP437-201ENST00000517249 129 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 RPL21P9-201ENST00000556149 474 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.8□□□□□ -2.12
USP41Q3LFD5 MIR3618-201ENST00000580330 88 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 MIR4713-201ENST00000582691 75 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 DEFB117-201ENST00000602356 141 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 SNORD113-5-201ENST00000607261 78 ntBASIC1.8□□□□□ -2.12
USP41Q3LFD5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
USP41Q3LFD5 SNORD81.1-201ENST00000363064 77 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 SNORA63D-201ENST00000364359 132 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 SNORA63C-201ENST00000364578 129 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 RNU6-806P-201ENST00000365147 105 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 SNORD115-46-201ENST00000390982 71 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 RNU6-121P-201ENST00000410525 99 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.79□□□□□ -2.12
USP41Q3LFD5 LINC01399-202ENST00000458450 244 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 MTATP8P1-201ENST00000467115 207 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 AC098869.1-201ENST00000481627 292 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.79□□□□□ -2.12
USP41Q3LFD5 RNU6-1278P-201ENST00000516130 107 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.79□□□□□ -2.12
USP41Q3LFD5 MIR4303-201ENST00000581299 66 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 AC008737.2-201ENST00000599446 118 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 AL353621.2-201ENST00000605340 133 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.79□□□□□ -2.12
USP41Q3LFD5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.79□□□□□ -2.12
USP41Q3LFD5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
USP41Q3LFD5 Y_RNA.4-201ENST00000362333 112 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 SNORD114-7-201ENST00000362520 77 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 Y_RNA.26-201ENST00000362539 101 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 Y_RNA.64-201ENST00000362845 102 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 Y_RNA.276-201ENST00000364732 109 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 Y_RNA.361-201ENST00000365515 120 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.78□□□□□ -2.12
USP41Q3LFD5 RNU6-102P-201ENST00000384485 104 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 RNU2-61P-201ENST00000411069 191 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 RPL31P63-201ENST00000422565 375 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 AC010154.1-201ENST00000425857 269 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 POLR2KP2-201ENST00000438155 177 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 HSPE1P9-201ENST00000440046 311 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 RPS26P45-201ENST00000471748 340 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.78□□□□□ -2.12
USP41Q3LFD5 SCARNA15.1-201ENST00000516384 125 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 RNU6-1337P-201ENST00000516525 95 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.78□□□□□ -2.12
USP41Q3LFD5 MIR3145-201ENST00000580727 82 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 AC010900.2-201ENST00000604508 210 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 AL360085.1-201ENST00000604713 532 ntBASIC1.78□□□□□ -2.12
USP41Q3LFD5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.78□□□□□ -2.12
USP41Q3LFD5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.78□□□□□ -2.13
USP41Q3LFD5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.77□□□□□ -2.13
USP41Q3LFD5 Y_RNA.383-201ENST00000383855 97 ntBASIC1.77□□□□□ -2.13
USP41Q3LFD5 RPL21P1-201ENST00000399532 476 ntBASIC1.77□□□□□ -2.13
USP41Q3LFD5 AP1B1P2-201ENST00000416196 106 ntBASIC1.77□□□□□ -2.13
USP41Q3LFD5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.77□□□□□ -2.13
USP41Q3LFD5 AL606517.2-201ENST00000442855 241 ntBASIC1.77□□□□□ -2.13
USP41Q3LFD5 RPL36AP21-201ENST00000490372 323 ntBASIC1.77□□□□□ -2.13
USP41Q3LFD5 CBX3P4-201ENST00000538909 354 ntBASIC1.77□□□□□ -2.13
USP41Q3LFD5 AC099654.10-201ENST00000640395 161 ntBASIC1.77□□□□□ -2.13
USP41Q3LFD5 AC018630.2-201ENST00000534866 2403 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 Y_RNA.145-201ENST00000363527 102 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 Y_RNA.164-201ENST00000363709 102 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 SNORA4.2-201ENST00000365313 147 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 Y_RNA.459-201ENST00000384251 102 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
USP41Q3LFD5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
USP41Q3LFD5 RNU6-855P-201ENST00000410395 104 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 RPL21P38-201ENST00000418090 167 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.76□□□□□ -2.13
USP41Q3LFD5 AC245047.3-201ENST00000429428 127 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 DYNLT3P2-201ENST00000442517 295 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 RNU6-1143P-201ENST00000516125 104 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 RNU6-496P-201ENST00000516145 99 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 RNA5SP481-201ENST00000516814 122 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 AP003733.2-201ENST00000529409 171 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 AC022217.4-201ENST00000604389 163 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 MIR6079-201ENST00000635807 62 ntBASIC1.76□□□□□ -2.13
USP41Q3LFD5 RNU4-90P-201ENST00000362773 141 ntBASIC1.75□□□□□ -2.13
USP41Q3LFD5 RNU6-238P-201ENST00000363313 106 ntBASIC1.75□□□□□ -2.13
USP41Q3LFD5 Y_RNA.162-201ENST00000363683 102 ntBASIC1.75□□□□□ -2.13
USP41Q3LFD5 Y_RNA.172-201ENST00000363765 102 ntBASIC1.75□□□□□ -2.13
USP41Q3LFD5 Y_RNA.238-201ENST00000364441 102 ntBASIC1.75□□□□□ -2.13
USP41Q3LFD5 Y_RNA.267-201ENST00000364679 109 ntBASIC1.75□□□□□ -2.13
USP41Q3LFD5 RNU6-117P-201ENST00000365415 107 ntBASIC1.75□□□□□ -2.13
USP41Q3LFD5 RNU6-439P-201ENST00000384188 106 ntBASIC1.75□□□□□ -2.13
USP41Q3LFD5 RNU6-738P-201ENST00000384531 106 ntBASIC1.75□□□□□ -2.13
USP41Q3LFD5 MIR215-201ENST00000384858 110 ntBASIC1.75□□□□□ -2.13
USP41Q3LFD5 RNU11-5P-201ENST00000391216 129 ntBASIC1.75□□□□□ -2.13
USP41Q3LFD5 RNA5SP511-201ENST00000410487 115 ntBASIC1.75□□□□□ -2.13
USP41Q3LFD5 COX6CP10-201ENST00000416832 224 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms