Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 MIR2053-201ENST00000459295 91 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 RNU7-94P-201ENST00000459576 63 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 RPS29P1-201ENST00000465274 159 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 RNU6-917P-201ENST00000516294 104 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 SNORA20.3-201ENST00000516880 132 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 CYCSP23-201ENST00000519781 313 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 AC023442.1-201ENST00000531247 422 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.93□□□□□ -2.26
SMARCB1Q12824 MIR3973-201ENST00000579824 107 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 MIR151B-201ENST00000584249 96 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.93□□□□□ -2.26
SMARCB1Q12824 MIR873-201ENST00000401120 77 ntBASIC0.92□□□□□ -2.26
SMARCB1Q12824 RNU6-1156P-201ENST00000410365 100 ntBASIC0.92□□□□□ -2.26
SMARCB1Q12824 RNU6-408P-201ENST00000515910 100 ntBASIC0.92□□□□□ -2.26
SMARCB1Q12824 RNU6-277P-201ENST00000516272 106 ntBASIC0.92□□□□□ -2.26
SMARCB1Q12824 RNU6-341P-201ENST00000516973 96 ntBASIC0.92□□□□□ -2.26
SMARCB1Q12824 RNU2-12P-201ENST00000517216 168 ntBASIC0.92□□□□□ -2.26
SMARCB1Q12824 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.92□□□□□ -2.26
SMARCB1Q12824 AC011604.1-201ENST00000545978 196 ntBASIC0.92□□□□□ -2.26
SMARCB1Q12824 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.92□□□□□ -2.26
SMARCB1Q12824 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.92□□□□□ -2.26
SMARCB1Q12824 MIR8065-201ENST00000620577 100 ntBASIC0.92□□□□□ -2.26
SMARCB1Q12824 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.92□□□□□ -2.26
SMARCB1Q12824 Y_RNA.101-201ENST00000363154 102 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 RNU1-124P-201ENST00000363861 145 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 SNORD115-30-201ENST00000364117 82 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 RNU6-926P-201ENST00000384075 107 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 SNORD116-29-201ENST00000384516 83 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 Y_RNA.577-201ENST00000384794 101 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 MIR653-201ENST00000385279 96 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 MTCYBP4-201ENST00000401524 249 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 MIR548J-201ENST00000408833 112 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 AC138393.2-201ENST00000414742 246 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 AC114482.1-201ENST00000418010 247 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 MTND4P28-201ENST00000426217 387 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 RPS4XP11-201ENST00000446897 772 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 CHEK2P4-201ENST00000450340 246 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.91□□□□□ -2.26
SMARCB1Q12824 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.91□□□□□ -2.26
SMARCB1Q12824 SNORD116-28-201ENST00000516123 91 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 RNU6-1223P-201ENST00000517124 104 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 RNU6-1116P-201ENST00000517269 99 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 AL117336.2-201ENST00000602435 335 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 AL355073.2-201ENST00000612106 557 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 AC004467.1-201ENST00000615678 330 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 AC138305.3-201ENST00000624988 240 ntBASIC0.91□□□□□ -2.26
SMARCB1Q12824 Y_RNA.172-201ENST00000363765 102 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 RNU4-41P-201ENST00000364426 143 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 RNU4-76P-201ENST00000364509 141 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 RNU6-708P-201ENST00000384217 107 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 RNU6-136P-201ENST00000384663 107 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 RNU6-376P-201ENST00000384731 106 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 MIR559-201ENST00000385188 96 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 AC004941.2-201ENST00000427009 228 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 Z98949.2-201ENST00000440996 144 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 RNU7-169P-201ENST00000459456 61 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 RNU6-307P-201ENST00000516743 106 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.9□□□□□ -2.27
SMARCB1Q12824 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.9□□□□□ -2.27
SMARCB1Q12824 FAM71BP1-201ENST00000604431 523 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 AC108706.1-201ENST00000611053 297 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 RMST_2.1-201ENST00000617263 136 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 AC027335.2-201ENST00000624030 375 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 AC127459.3-201ENST00000624328 466 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 MTND4LP32-201ENST00000636111 270 ntBASIC0.9□□□□□ -2.27
SMARCB1Q12824 Y_RNA.265-201ENST00000364677 108 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 Y_RNA.363-201ENST00000365529 113 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 SNORD116-13-201ENST00000384408 92 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 MIR526A1-201ENST00000384897 85 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 SNORA69.1-201ENST00000390904 137 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 RNA5SP475-201ENST00000410568 110 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 RNU6-1199P-201ENST00000411249 104 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.89□□□□□ -2.27
SMARCB1Q12824 RPEP5-201ENST00000441137 268 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.89□□□□□ -2.27
SMARCB1Q12824 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.89□□□□□ -2.27
SMARCB1Q12824 AC048334.1-201ENST00000477975 159 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 RNU6-470P-201ENST00000515954 104 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 RNU6-559P-201ENST00000516151 98 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 RNU2-56P-201ENST00000516826 190 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 AL162424.1-201ENST00000602325 221 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 AC011476.5-201ENST00000615594 130 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 AC099654.14-201ENST00000638599 341 ntBASIC0.89□□□□□ -2.27
SMARCB1Q12824 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SMARCB1Q12824 RNU6-199P-201ENST00000362954 107 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 RNA5SP511-201ENST00000410487 115 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 AL354751.2-201ENST00000415471 210 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.88□□□□□ -2.27
SMARCB1Q12824 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.88□□□□□ -2.27
SMARCB1Q12824 AC096644.2-201ENST00000429278 159 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 AC098614.3-201ENST00000438957 440 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 snoU13.25-201ENST00000458945 104 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 AL049830.1-201ENST00000468034 425 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 RNU6-1278P-201ENST00000516130 107 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 RNU6-1337P-201ENST00000516525 95 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 RNU6-1096P-201ENST00000517089 102 ntBASIC0.88□□□□□ -2.27
SMARCB1Q12824 AP002004.2-201ENST00000531656 154 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 228.7 ms