Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 RN7SKP101-201ENST00000411376 320 ntBASIC2.56□□□□□ -2
IRF9Q00978 RPS26P45-201ENST00000471748 340 ntBASIC2.56□□□□□ -2
IRF9Q00978 RNA5SP282-201ENST00000516355 108 ntBASIC2.56□□□□□ -2
IRF9Q00978 RNU6-826P-201ENST00000516827 104 ntBASIC2.56□□□□□ -2
IRF9Q00978 AC091178.2-201ENST00000584401 117 ntBASIC2.56□□□□□ -2
IRF9Q00978 AC018630.2-201ENST00000534866 2403 ntBASIC2.56□□□□□ -2
IRF9Q00978 Y_RNA.8-201ENST00000362353 102 ntBASIC2.55□□□□□ -2
IRF9Q00978 Y_RNA.357-201ENST00000365487 109 ntBASIC2.55□□□□□ -2
IRF9Q00978 MIR1278-201ENST00000408753 81 ntBASIC2.55□□□□□ -2
IRF9Q00978 BX510359.4-201ENST00000423750 193 ntBASIC2.55□□□□□ -2
IRF9Q00978 AC063976.3-201ENST00000426849 329 ntBASIC2.55□□□□□ -2
IRF9Q00978 AC099677.2-201ENST00000436385 175 ntBASIC2.55□□□□□ -2
IRF9Q00978 Y_RNA.703-201ENST00000516846 111 ntBASIC2.55□□□□□ -2
IRF9Q00978 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.55□□□□□ -2
IRF9Q00978 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
IRF9Q00978 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
IRF9Q00978 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
IRF9Q00978 AC005786.1-201ENST00000588553 154 ntBASIC2.55□□□□□ -2
IRF9Q00978 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
IRF9Q00978 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.55□□□□□ -2
IRF9Q00978 AC022513.1-201ENST00000624512 117 ntBASIC2.55□□□□□ -2
IRF9Q00978 MIR6079-201ENST00000635807 62 ntBASIC2.55□□□□□ -2
IRF9Q00978 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.55□□□□□ -2
IRF9Q00978 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.55□□□□□ -2
IRF9Q00978 RNU4-84P-201ENST00000364200 139 ntBASIC2.54□□□□□ -2
IRF9Q00978 RNY3P5-201ENST00000384127 102 ntBASIC2.54□□□□□ -2
IRF9Q00978 Y_RNA.506-201ENST00000384494 102 ntBASIC2.54□□□□□ -2
IRF9Q00978 Y_RNA.510-201ENST00000384511 114 ntBASIC2.54□□□□□ -2
IRF9Q00978 SNORA11.4-201ENST00000408823 129 ntBASIC2.54□□□□□ -2
IRF9Q00978 RN7SKP132-201ENST00000516001 208 ntBASIC2.54□□□□□ -2
IRF9Q00978 RNU6-1291P-201ENST00000516591 104 ntBASIC2.54□□□□□ -2
IRF9Q00978 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.54□□□□□ -2
IRF9Q00978 MIR4431-201ENST00000579990 94 ntBASIC2.54□□□□□ -2
IRF9Q00978 MIR2681-201ENST00000581814 105 ntBASIC2.54□□□□□ -2
IRF9Q00978 MIR3133-201ENST00000583157 78 ntBASIC2.54□□□□□ -2
IRF9Q00978 AL021707.8-201ENST00000609428 183 ntBASIC2.54□□□□□ -2
IRF9Q00978 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.54□□□□□ -2
IRF9Q00978 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.54□□□□□ -2
IRF9Q00978 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
IRF9Q00978 ZNF271P-202ENST00000465539 1970 ntBASIC2.54□□□□□ -2
IRF9Q00978 Y_RNA.398-201ENST00000383952 99 ntBASIC2.53□□□□□ -2
IRF9Q00978 Y_RNA.621-201ENST00000411065 96 ntBASIC2.53□□□□□ -2
IRF9Q00978 RNU4-61P-201ENST00000411243 107 ntBASIC2.53□□□□□ -2
IRF9Q00978 AL121914.1-201ENST00000450188 156 ntBASIC2.53□□□□□ -2
IRF9Q00978 AC233266.1-201ENST00000454518 96 ntBASIC2.53□□□□□ -2
IRF9Q00978 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.53□□□□□ -2
IRF9Q00978 RNA5SP367-201ENST00000516557 118 ntBASIC2.53□□□□□ -2
IRF9Q00978 RNU6-341P-201ENST00000516973 96 ntBASIC2.53□□□□□ -2
IRF9Q00978 MTND5P41-201ENST00000517498 206 ntBASIC2.53□□□□□ -2
IRF9Q00978 GTF3AP2-201ENST00000557014 266 ntBASIC2.53□□□□□ -2
IRF9Q00978 ELOCP29-201ENST00000588193 334 ntBASIC2.53□□□□□ -2
IRF9Q00978 AC242852.1-201ENST00000612151 96 ntBASIC2.53□□□□□ -2
IRF9Q00978 AC244015.1-201ENST00000622301 99 ntBASIC2.53□□□□□ -2
IRF9Q00978 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
IRF9Q00978 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
IRF9Q00978 AC245060.5-201ENST00000610778 3293 ntBASIC2.53□□□□□ -2
IRF9Q00978 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
IRF9Q00978 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
IRF9Q00978 RNU6-728P-201ENST00000365375 104 ntBASIC2.52□□□□□ -2.01
IRF9Q00978 RNU6-125P-201ENST00000384505 107 ntBASIC2.52□□□□□ -2.01
IRF9Q00978 MIR562-201ENST00000384894 95 ntBASIC2.52□□□□□ -2.01
IRF9Q00978 MIR15B-201ENST00000385045 98 ntBASIC2.52□□□□□ -2.01
IRF9Q00978 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.52□□□□□ -2.01
IRF9Q00978 RNU7-94P-201ENST00000459576 63 ntBASIC2.52□□□□□ -2.01
IRF9Q00978 UBE2DNL-203ENST00000474922 222 ntBASIC2.52□□□□□ -2.01
IRF9Q00978 AL163195.1-201ENST00000496941 348 ntBASIC2.52□□□□□ -2.01
IRF9Q00978 RNU7-200P-201ENST00000516105 62 ntBASIC2.52□□□□□ -2.01
IRF9Q00978 RPL23AP91-201ENST00000569211 455 ntBASIC2.52□□□□□ -2.01
IRF9Q00978 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.52□□□□□ -2.01
IRF9Q00978 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.52□□□□□ -2.01
IRF9Q00978 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
IRF9Q00978 Y_RNA.267-201ENST00000364679 109 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 RNY1P5-201ENST00000383890 115 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 RNU1-109P-201ENST00000383960 147 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 SNORD116-18-201ENST00000383961 92 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 RNU6-1080P-201ENST00000383982 107 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 Y_RNA.500-201ENST00000384466 111 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 MIR9-1-201ENST00000385198 89 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 Y_RNA.580-201ENST00000391004 95 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 AC105272.1-201ENST00000438604 198 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 TRBV12-1-201ENST00000479785 344 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 AC107027.2-201ENST00000512197 115 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 RNA5SP356-201ENST00000515972 94 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 RNU6-561P-201ENST00000516222 102 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 MIR5092-201ENST00000583139 88 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.51□□□□□ -2.01
IRF9Q00978 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 AC012640.5-201ENST00000623897 319 ntBASIC2.51□□□□□ -2.01
IRF9Q00978 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
IRF9Q00978 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
IRF9Q00978 RNU6-1209P-201ENST00000363655 107 ntBASIC2.5□□□□□ -2.01
IRF9Q00978 Y_RNA.796-201ENST00000364268 102 ntBASIC2.5□□□□□ -2.01
IRF9Q00978 Y_RNA.799-201ENST00000364992 102 ntBASIC2.5□□□□□ -2.01
IRF9Q00978 RNU6-1130P-201ENST00000365434 107 ntBASIC2.5□□□□□ -2.01
IRF9Q00978 MIR597-201ENST00000384968 97 ntBASIC2.5□□□□□ -2.01
IRF9Q00978 RNU6-239P-201ENST00000390990 99 ntBASIC2.5□□□□□ -2.01
IRF9Q00978 RNU11-3P-201ENST00000391111 133 ntBASIC2.5□□□□□ -2.01
IRF9Q00978 Y_RNA.587-201ENST00000391210 103 ntBASIC2.5□□□□□ -2.01
IRF9Q00978 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.5□□□□□ -2.01
IRF9Q00978 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms