Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 RNU6-1337P-201ENST00000516525 95 ntBASIC2.18□□□□□ -2.06
TTC3P53804 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.18□□□□□ -2.06
TTC3P53804 AC018630.3-201ENST00000542637 96 ntBASIC2.18□□□□□ -2.06
TTC3P53804 AC009127.3-201ENST00000570531 403 ntBASIC2.18□□□□□ -2.06
TTC3P53804 DNAJC19P2-201ENST00000593340 302 ntBASIC2.18□□□□□ -2.06
TTC3P53804 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TTC3P53804 SNORA27.1-201ENST00000362604 124 ntBASIC2.17□□□□□ -2.06
TTC3P53804 Y_RNA.140-201ENST00000363474 103 ntBASIC2.17□□□□□ -2.06
TTC3P53804 RNU6-975P-201ENST00000384296 105 ntBASIC2.17□□□□□ -2.06
TTC3P53804 AC016925.1-201ENST00000458303 298 ntBASIC2.17□□□□□ -2.06
TTC3P53804 RNU7-115P-201ENST00000516433 55 ntBASIC2.17□□□□□ -2.06
TTC3P53804 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.17□□□□□ -2.06
TTC3P53804 AC022616.8-201ENST00000533569 253 ntBASIC2.17□□□□□ -2.06
TTC3P53804 MIR4753-201ENST00000585119 83 ntBASIC2.17□□□□□ -2.06
TTC3P53804 AP003357.1-201ENST00000604497 148 ntBASIC2.17□□□□□ -2.06
TTC3P53804 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.17□□□□□ -2.06
TTC3P53804 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TTC3P53804 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TTC3P53804 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
TTC3P53804 SNORD31B-201ENST00000364977 69 ntBASIC2.17□□□□□ -2.06
TTC3P53804 RNU6-407P-201ENST00000365280 104 ntBASIC2.17□□□□□ -2.06
TTC3P53804 RNU6-80P-201ENST00000384195 107 ntBASIC2.17□□□□□ -2.06
TTC3P53804 RNU6-1081P-201ENST00000384537 107 ntBASIC2.17□□□□□ -2.06
TTC3P53804 MIR300-201ENST00000401138 83 ntBASIC2.17□□□□□ -2.06
TTC3P53804 AC097462.1-201ENST00000514125 324 ntBASIC2.17□□□□□ -2.06
TTC3P53804 SCARNA8-201ENST00000515924 131 ntBASIC2.17□□□□□ -2.06
TTC3P53804 SUMO2P18-201ENST00000518873 252 ntBASIC2.17□□□□□ -2.06
TTC3P53804 AC109810.1-201ENST00000534066 224 ntBASIC2.17□□□□□ -2.06
TTC3P53804 AP000942.3-201ENST00000603702 160 ntBASIC2.17□□□□□ -2.06
TTC3P53804 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
TTC3P53804 AC068700.1-201ENST00000565862 3754 ntBASIC2.16□□□□□ -2.06
TTC3P53804 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TTC3P53804 AC131280.1-202ENST00000624067 4211 ntBASIC2.16□□□□□ -2.06
TTC3P53804 RNU1-109P-201ENST00000383960 147 ntBASIC2.16□□□□□ -2.06
TTC3P53804 MIR9-3-201ENST00000385084 90 ntBASIC2.16□□□□□ -2.06
TTC3P53804 SEPT7P4-201ENST00000437076 306 ntBASIC2.16□□□□□ -2.06
TTC3P53804 Z96811.1-201ENST00000445880 108 ntBASIC2.16□□□□□ -2.06
TTC3P53804 RNU7-14P-201ENST00000459331 62 ntBASIC2.16□□□□□ -2.06
TTC3P53804 RNU6-1007P-201ENST00000516586 107 ntBASIC2.16□□□□□ -2.06
TTC3P53804 AL031274.2-201ENST00000599419 203 ntBASIC2.16□□□□□ -2.06
TTC3P53804 MIR5739-201ENST00000619803 80 ntBASIC2.16□□□□□ -2.06
TTC3P53804 AC006435.5-201ENST00000624486 112 ntBASIC2.16□□□□□ -2.06
TTC3P53804 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TTC3P53804 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TTC3P53804 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.16□□□□□ -2.06
TTC3P53804 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
TTC3P53804 MIR627-201ENST00000384979 97 ntBASIC2.15□□□□□ -2.06
TTC3P53804 AL445685.2-201ENST00000422551 342 ntBASIC2.15□□□□□ -2.06
TTC3P53804 AC074290.1-201ENST00000448883 135 ntBASIC2.15□□□□□ -2.06
TTC3P53804 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.15□□□□□ -2.06
TTC3P53804 AC015720.1-201ENST00000565251 277 ntBASIC2.15□□□□□ -2.06
TTC3P53804 AL365265.1-201ENST00000621045 234 ntBASIC2.15□□□□□ -2.06
TTC3P53804 AC090517.3-201ENST00000625170 141 ntBASIC2.15□□□□□ -2.06
TTC3P53804 MIR7515-201ENST00000637837 67 ntBASIC2.15□□□□□ -2.06
TTC3P53804 AC134026.1-201ENST00000623249 2239 ntBASIC2.15□□□□□ -2.07
TTC3P53804 MAPK10-266ENST00000641066 6555 ntBASIC2.15□□□□□ -2.07
TTC3P53804 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TTC3P53804 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TTC3P53804 Y_RNA.121-201ENST00000363309 113 ntBASIC2.15□□□□□ -2.07
TTC3P53804 Y_RNA.172-201ENST00000363765 102 ntBASIC2.15□□□□□ -2.07
TTC3P53804 RNU6-1048P-201ENST00000364054 107 ntBASIC2.15□□□□□ -2.07
TTC3P53804 SNORD32B-201ENST00000364460 84 ntBASIC2.15□□□□□ -2.07
TTC3P53804 SNORA68.1-201ENST00000364537 132 ntBASIC2.15□□□□□ -2.07
TTC3P53804 AL161788.1-201ENST00000441805 169 ntBASIC2.15□□□□□ -2.07
TTC3P53804 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
TTC3P53804 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.15□□□□□ -2.07
TTC3P53804 AL449363.1-201ENST00000617815 186 ntBASIC2.15□□□□□ -2.07
TTC3P53804 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TTC3P53804 MIR626-201ENST00000385032 94 ntBASIC2.14□□□□□ -2.07
TTC3P53804 RNU6-578P-201ENST00000390980 103 ntBASIC2.14□□□□□ -2.07
TTC3P53804 RPL23AP58-201ENST00000440453 469 ntBASIC2.14□□□□□ -2.07
TTC3P53804 RNU6-1146P-201ENST00000516282 102 ntBASIC2.14□□□□□ -2.07
TTC3P53804 NDUFA5P6-201ENST00000542110 379 ntBASIC2.14□□□□□ -2.07
TTC3P53804 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.14□□□□□ -2.07
TTC3P53804 MIR3199-1-201ENST00000582434 88 ntBASIC2.14□□□□□ -2.07
TTC3P53804 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.14□□□□□ -2.07
TTC3P53804 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
TTC3P53804 ZNF720P1-201ENST00000562403 1939 ntBASIC2.14□□□□□ -2.07
TTC3P53804 Y_RNA.332-201ENST00000365271 113 ntBASIC2.13□□□□□ -2.07
TTC3P53804 RNU6-546P-201ENST00000383991 107 ntBASIC2.13□□□□□ -2.07
TTC3P53804 RNU6-22P-201ENST00000384355 107 ntBASIC2.13□□□□□ -2.07
TTC3P53804 MIR613-201ENST00000385248 95 ntBASIC2.13□□□□□ -2.07
TTC3P53804 RNU6-381P-201ENST00000391259 108 ntBASIC2.13□□□□□ -2.07
TTC3P53804 RNU2-51P-201ENST00000410708 197 ntBASIC2.13□□□□□ -2.07
TTC3P53804 AL357134.1-201ENST00000445848 426 ntBASIC2.13□□□□□ -2.07
TTC3P53804 RPL23AP54-201ENST00000495129 419 ntBASIC2.13□□□□□ -2.07
TTC3P53804 RN7SKP164-201ENST00000516138 266 ntBASIC2.13□□□□□ -2.07
TTC3P53804 RNU6-426P-201ENST00000516464 97 ntBASIC2.13□□□□□ -2.07
TTC3P53804 RNU6-586P-201ENST00000517265 104 ntBASIC2.13□□□□□ -2.07
TTC3P53804 MIR4255-201ENST00000579351 72 ntBASIC2.13□□□□□ -2.07
TTC3P53804 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
TTC3P53804 AL157777.2-201ENST00000258070 137 ntBASIC2.13□□□□□ -2.07
TTC3P53804 RNU6-151P-201ENST00000364158 107 ntBASIC2.13□□□□□ -2.07
TTC3P53804 RNU6-1240P-201ENST00000365155 104 ntBASIC2.13□□□□□ -2.07
TTC3P53804 SNORD113-1-201ENST00000365321 69 ntBASIC2.13□□□□□ -2.07
TTC3P53804 Y_RNA.497-201ENST00000384447 98 ntBASIC2.13□□□□□ -2.07
TTC3P53804 Y_RNA.580-201ENST00000391004 95 ntBASIC2.13□□□□□ -2.07
TTC3P53804 RNU6-855P-201ENST00000410395 104 ntBASIC2.13□□□□□ -2.07
TTC3P53804 SNORD13-201ENST00000459299 104 ntBASIC2.13□□□□□ -2.07
TTC3P53804 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms