Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC090255.1-201ENST00000495779 349 ntBASIC4.33□□□□□ -1.72
NUBP1P53384 RNU7-35P-201ENST00000517174 62 ntBASIC4.33□□□□□ -1.72
NUBP1P53384 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.33□□□□□ -1.72
NUBP1P53384 U4atac.1-201ENST00000618345 95 ntBASIC4.33□□□□□ -1.72
NUBP1P53384 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.33□□□□□ -1.72
NUBP1P53384 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUBP1P53384 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUBP1P53384 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUBP1P53384 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUBP1P53384 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.33□□□□□ -1.72
NUBP1P53384 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.33□□□□□ -1.72
NUBP1P53384 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUBP1P53384 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
NUBP1P53384 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
NUBP1P53384 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NUBP1P53384 RNA5SP124-201ENST00000362739 110 ntBASIC4.32□□□□□ -1.72
NUBP1P53384 Y_RNA.448-201ENST00000384185 108 ntBASIC4.32□□□□□ -1.72
NUBP1P53384 RNU6-380P-201ENST00000410207 107 ntBASIC4.32□□□□□ -1.72
NUBP1P53384 RNU6-519P-201ENST00000410590 108 ntBASIC4.32□□□□□ -1.72
NUBP1P53384 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.32□□□□□ -1.72
NUBP1P53384 RNA5SP519-201ENST00000516480 119 ntBASIC4.32□□□□□ -1.72
NUBP1P53384 SNORA70.19-201ENST00000516717 90 ntBASIC4.32□□□□□ -1.72
NUBP1P53384 MTND5P40-201ENST00000559945 246 ntBASIC4.32□□□□□ -1.72
NUBP1P53384 SCARNA15.3-201ENST00000626315 122 ntBASIC4.32□□□□□ -1.72
NUBP1P53384 SCARNA4.1-201ENST00000628597 123 ntBASIC4.32□□□□□ -1.72
NUBP1P53384 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.32□□□□□ -1.72
NUBP1P53384 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.32□□□□□ -1.72
NUBP1P53384 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUBP1P53384 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.32□□□□□ -1.72
NUBP1P53384 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NUBP1P53384 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.31□□□□□ -1.72
NUBP1P53384 CD24P4-201ENST00000382840 243 ntBASIC4.31□□□□□ -1.72
NUBP1P53384 RNU6-913P-201ENST00000390913 95 ntBASIC4.31□□□□□ -1.72
NUBP1P53384 MIR1262-201ENST00000408276 93 ntBASIC4.31□□□□□ -1.72
NUBP1P53384 AC003685.2-201ENST00000422795 395 ntBASIC4.31□□□□□ -1.72
NUBP1P53384 HMGN2P7-201ENST00000456186 273 ntBASIC4.31□□□□□ -1.72
NUBP1P53384 RNA5SP168-201ENST00000516642 112 ntBASIC4.31□□□□□ -1.72
NUBP1P53384 AC007336.1-201ENST00000576365 3828 ntBASIC4.31□□□□□ -1.72
NUBP1P53384 MIR3169-201ENST00000578032 83 ntBASIC4.31□□□□□ -1.72
NUBP1P53384 AC012531.5-201ENST00000611375 151 ntBASIC4.31□□□□□ -1.72
NUBP1P53384 MIR6500-201ENST00000622700 86 ntBASIC4.31□□□□□ -1.72
NUBP1P53384 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.31□□□□□ -1.72
NUBP1P53384 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NUBP1P53384 AC087190.4-201ENST00000574616 8334 ntBASIC4.31□□□□□ -1.72
NUBP1P53384 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUBP1P53384 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUBP1P53384 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUBP1P53384 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.3□□□□□ -1.72
NUBP1P53384 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUBP1P53384 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUBP1P53384 RNU6-1019P-201ENST00000364424 107 ntBASIC4.3□□□□□ -1.72
NUBP1P53384 RNA5SP138-201ENST00000365098 114 ntBASIC4.3□□□□□ -1.72
NUBP1P53384 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NUBP1P53384 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC4.3□□□□□ -1.72
NUBP1P53384 AC069114.2-201ENST00000604699 304 ntBASIC4.3□□□□□ -1.72
NUBP1P53384 AC012676.2-201ENST00000619258 186 ntBASIC4.3□□□□□ -1.72
NUBP1P53384 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.3□□□□□ -1.72
NUBP1P53384 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUBP1P53384 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUBP1P53384 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUBP1P53384 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
NUBP1P53384 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUBP1P53384 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUBP1P53384 Y_RNA.98-201ENST00000363109 102 ntBASIC4.29□□□□□ -1.72
NUBP1P53384 Y_RNA.173-201ENST00000363776 113 ntBASIC4.29□□□□□ -1.72
NUBP1P53384 RNU6-342P-201ENST00000384521 104 ntBASIC4.29□□□□□ -1.72
NUBP1P53384 MIR181B2-201ENST00000385004 89 ntBASIC4.29□□□□□ -1.72
NUBP1P53384 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NUBP1P53384 RNU6-1307P-201ENST00000391012 103 ntBASIC4.29□□□□□ -1.72
NUBP1P53384 RNU1-95P-201ENST00000516357 160 ntBASIC4.29□□□□□ -1.72
NUBP1P53384 SNORA31.10-201ENST00000516482 106 ntBASIC4.29□□□□□ -1.72
NUBP1P53384 RNU1-128P-201ENST00000516704 160 ntBASIC4.29□□□□□ -1.72
NUBP1P53384 CYCSP30-201ENST00000546447 172 ntBASIC4.29□□□□□ -1.72
NUBP1P53384 uc_338.32-201ENST00000615087 172 ntBASIC4.29□□□□□ -1.72
NUBP1P53384 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.29□□□□□ -1.72
NUBP1P53384 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUBP1P53384 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.28□□□□□ -1.72
NUBP1P53384 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUBP1P53384 RNU1-101P-201ENST00000391171 127 ntBASIC4.28□□□□□ -1.72
NUBP1P53384 DHX9P1-201ENST00000436565 3076 ntBASIC4.28□□□□□ -1.72
NUBP1P53384 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
NUBP1P53384 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.28□□□□□ -1.72
NUBP1P53384 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUBP1P53384 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.28□□□□□ -1.72
NUBP1P53384 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
NUBP1P53384 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NUBP1P53384 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.27□□□□□ -1.73
NUBP1P53384 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.27□□□□□ -1.73
NUBP1P53384 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUBP1P53384 AC107068.1-201ENST00000563286 4218 ntBASIC4.27□□□□□ -1.73
NUBP1P53384 SNORD114-10-201ENST00000363409 72 ntBASIC4.27□□□□□ -1.73
NUBP1P53384 MIR183-201ENST00000384958 110 ntBASIC4.27□□□□□ -1.73
NUBP1P53384 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NUBP1P53384 RNU6-1086P-201ENST00000410930 100 ntBASIC4.27□□□□□ -1.73
NUBP1P53384 RNU6-602P-201ENST00000411155 105 ntBASIC4.27□□□□□ -1.73
NUBP1P53384 SNORA25.13-201ENST00000516395 103 ntBASIC4.27□□□□□ -1.73
NUBP1P53384 SNORD67.1-201ENST00000516618 108 ntBASIC4.27□□□□□ -1.73
NUBP1P53384 YPEL5P3-201ENST00000547227 352 ntBASIC4.27□□□□□ -1.73
NUBP1P53384 AC005786.1-201ENST00000588553 154 ntBASIC4.27□□□□□ -1.73
NUBP1P53384 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms