Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RNU6-1270P-201ENST00000517128 108 ntBASIC1.5□□□□□ -2.17
PCP4P48539 RNU6-165P-201ENST00000517170 99 ntBASIC1.5□□□□□ -2.17
PCP4P48539 AC007751.1-201ENST00000529260 376 ntBASIC1.5□□□□□ -2.17
PCP4P48539 AP001485.1-201ENST00000604799 199 ntBASIC1.5□□□□□ -2.17
PCP4P48539 GHRLOS.1-201ENST00000610995 70 ntBASIC1.5□□□□□ -2.17
PCP4P48539 AL121890.5-201ENST00000620848 304 ntBASIC1.5□□□□□ -2.17
PCP4P48539 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.5□□□□□ -2.17
PCP4P48539 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PCP4P48539 MIR548A2-201ENST00000384956 97 ntBASIC1.49□□□□□ -2.17
PCP4P48539 SNORD28B-201ENST00000390993 75 ntBASIC1.49□□□□□ -2.17
PCP4P48539 RNU6-847P-201ENST00000411115 108 ntBASIC1.49□□□□□ -2.17
PCP4P48539 Y_RNA.793-201ENST00000411222 111 ntBASIC1.49□□□□□ -2.17
PCP4P48539 AL353779.2-201ENST00000424917 308 ntBASIC1.49□□□□□ -2.17
PCP4P48539 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.49□□□□□ -2.17
PCP4P48539 SNRPGP13-201ENST00000442212 177 ntBASIC1.49□□□□□ -2.17
PCP4P48539 RN7SL502P-201ENST00000481857 290 ntBASIC1.49□□□□□ -2.17
PCP4P48539 RN7SL776P-201ENST00000493390 268 ntBASIC1.49□□□□□ -2.17
PCP4P48539 AC107393.1-201ENST00000512403 346 ntBASIC1.49□□□□□ -2.17
PCP4P48539 AC096725.1-201ENST00000514266 313 ntBASIC1.49□□□□□ -2.17
PCP4P48539 RNU4-57P-201ENST00000515980 135 ntBASIC1.49□□□□□ -2.17
PCP4P48539 RNU6-693P-201ENST00000516134 107 ntBASIC1.49□□□□□ -2.17
PCP4P48539 RNU6-1219P-201ENST00000516143 112 ntBASIC1.49□□□□□ -2.17
PCP4P48539 SNORA74.3-201ENST00000517108 154 ntBASIC1.49□□□□□ -2.17
PCP4P48539 RNU7-181P-201ENST00000517234 74 ntBASIC1.49□□□□□ -2.17
PCP4P48539 CYP3A52P-201ENST00000563326 91 ntBASIC1.49□□□□□ -2.17
PCP4P48539 SNRPGP19-201ENST00000603826 189 ntBASIC1.49□□□□□ -2.17
PCP4P48539 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.49□□□□□ -2.17
PCP4P48539 MIR6742-201ENST00000622338 62 ntBASIC1.49□□□□□ -2.17
PCP4P48539 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.49□□□□□ -2.17
PCP4P48539 HLA-B-257ENST00000640094 147 ntBASIC1.49□□□□□ -2.17
PCP4P48539 AL161722.3-201ENST00000605789 2983 ntBASIC1.49□□□□□ -2.17
PCP4P48539 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
PCP4P48539 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
PCP4P48539 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PCP4P48539 Y_RNA.233-201ENST00000364407 101 ntBASIC1.48□□□□□ -2.17
PCP4P48539 RNU6-275P-201ENST00000364910 107 ntBASIC1.48□□□□□ -2.17
PCP4P48539 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
PCP4P48539 MIR518F-201ENST00000384973 87 ntBASIC1.48□□□□□ -2.17
PCP4P48539 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
PCP4P48539 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
PCP4P48539 AL138752.1-201ENST00000452964 351 ntBASIC1.48□□□□□ -2.17
PCP4P48539 RPS29P22-201ENST00000472363 168 ntBASIC1.48□□□□□ -2.17
PCP4P48539 RN7SL209P-201ENST00000488309 276 ntBASIC1.48□□□□□ -2.17
PCP4P48539 RNU6-830P-201ENST00000516353 107 ntBASIC1.48□□□□□ -2.17
PCP4P48539 RNU6-197P-201ENST00000516680 100 ntBASIC1.48□□□□□ -2.17
PCP4P48539 AP002392.1-201ENST00000537692 208 ntBASIC1.48□□□□□ -2.17
PCP4P48539 GTF3AP2-201ENST00000557014 266 ntBASIC1.48□□□□□ -2.17
PCP4P48539 AC007224.1-201ENST00000564410 144 ntBASIC1.48□□□□□ -2.17
PCP4P48539 AC024614.2-201ENST00000577584 372 ntBASIC1.48□□□□□ -2.17
PCP4P48539 MIR548AR-201ENST00000582191 57 ntBASIC1.48□□□□□ -2.17
PCP4P48539 AC068870.2-201ENST00000620635 389 ntBASIC1.48□□□□□ -2.17
PCP4P48539 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PCP4P48539 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PCP4P48539 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PCP4P48539 Y_RNA.23-201ENST00000362496 106 ntBASIC1.47□□□□□ -2.17
PCP4P48539 SNORD114-30-201ENST00000364448 72 ntBASIC1.47□□□□□ -2.17
PCP4P48539 Y_RNA.435-201ENST00000384095 112 ntBASIC1.47□□□□□ -2.17
PCP4P48539 RNA5SP122-201ENST00000384457 108 ntBASIC1.47□□□□□ -2.17
PCP4P48539 U8.17-201ENST00000391292 132 ntBASIC1.47□□□□□ -2.17
PCP4P48539 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.47□□□□□ -2.17
PCP4P48539 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC1.47□□□□□ -2.17
PCP4P48539 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
PCP4P48539 RN7SL83P-201ENST00000468131 297 ntBASIC1.47□□□□□ -2.17
PCP4P48539 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.47□□□□□ -2.17
PCP4P48539 RNA5SP153-201ENST00000516498 76 ntBASIC1.47□□□□□ -2.17
PCP4P48539 RNU6-126P-201ENST00000516685 103 ntBASIC1.47□□□□□ -2.17
PCP4P48539 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC1.47□□□□□ -2.17
PCP4P48539 BOLA2P1-201ENST00000584794 232 ntBASIC1.47□□□□□ -2.17
PCP4P48539 AC093799.2-201ENST00000610062 578 ntBASIC1.47□□□□□ -2.17
PCP4P48539 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.46□□□□□ -2.18
PCP4P48539 SPRR2C-201ENST00000290702 219 ntBASIC1.46□□□□□ -2.18
PCP4P48539 Y_RNA.75-201ENST00000362927 97 ntBASIC1.46□□□□□ -2.18
PCP4P48539 SNORD15B-201ENST00000384714 146 ntBASIC1.46□□□□□ -2.18
PCP4P48539 SNORA26-201ENST00000391286 122 ntBASIC1.46□□□□□ -2.18
PCP4P48539 RNA5SP397-201ENST00000391323 118 ntBASIC1.46□□□□□ -2.18
PCP4P48539 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
PCP4P48539 MIR1224-201ENST00000408193 85 ntBASIC1.46□□□□□ -2.18
PCP4P48539 RNU4-43P-201ENST00000410628 137 ntBASIC1.46□□□□□ -2.18
PCP4P48539 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC1.46□□□□□ -2.18
PCP4P48539 AL355483.1-201ENST00000450469 237 ntTSL 3 BASIC1.46□□□□□ -2.18
PCP4P48539 RPL30P7-201ENST00000479312 323 ntBASIC1.46□□□□□ -2.18
PCP4P48539 SNORD111.1-201ENST00000516421 86 ntBASIC1.46□□□□□ -2.18
PCP4P48539 RNU6-504P-201ENST00000516568 104 ntBASIC1.46□□□□□ -2.18
PCP4P48539 SNORA70.18-201ENST00000516696 98 ntBASIC1.46□□□□□ -2.18
PCP4P48539 RNA5SP422-201ENST00000516778 111 ntBASIC1.46□□□□□ -2.18
PCP4P48539 RN7SKP88-201ENST00000516847 250 ntBASIC1.46□□□□□ -2.18
PCP4P48539 SNORA81.3-201ENST00000517283 198 ntBASIC1.46□□□□□ -2.18
PCP4P48539 MIR3192-201ENST00000584920 77 ntBASIC1.46□□□□□ -2.18
PCP4P48539 AC097639.2-201ENST00000603159 172 ntBASIC1.46□□□□□ -2.18
PCP4P48539 AL096861.1-201ENST00000610899 123 ntBASIC1.46□□□□□ -2.18
PCP4P48539 7SK.8-201ENST00000612110 250 ntBASIC1.46□□□□□ -2.18
PCP4P48539 7SK.11-201ENST00000615477 250 ntBASIC1.46□□□□□ -2.18
PCP4P48539 7SK.13-201ENST00000622040 250 ntBASIC1.46□□□□□ -2.18
PCP4P48539 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PCP4P48539 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
PCP4P48539 RNU6-888P-201ENST00000363010 101 ntBASIC1.45□□□□□ -2.18
PCP4P48539 SNORA9.2-201ENST00000365361 133 ntBASIC1.45□□□□□ -2.18
PCP4P48539 SNORD24-201ENST00000383884 75 ntBASIC1.45□□□□□ -2.18
PCP4P48539 MIR570-201ENST00000384917 97 ntBASIC1.45□□□□□ -2.18
PCP4P48539 MIR520C-201ENST00000385005 87 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms