Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 Y_RNA.461-201ENST00000384263 103 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 RNU6-21P-201ENST00000384710 107 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
HNF4AP41235 MIR1302-6-201ENST00000408466 90 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 RPL23AP36-201ENST00000413895 458 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 AL390729.2-201ENST00000416137 156 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 AC245047.4-201ENST00000433189 144 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 HSPE1P24-201ENST00000450782 238 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 AC005042.3-201ENST00000453230 174 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 TRBVB-201ENST00000477100 408 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.67□□□□□ -2.14
HNF4AP41235 MIR3149-201ENST00000584629 83 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 AC005828.6-201ENST00000606610 232 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 AL353149.1-201ENST00000610667 244 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 AP001282.2-201ENST00000616149 309 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 U4.1-201ENST00000620349 87 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 AC006001.4-201ENST00000622243 395 ntBASIC1.67□□□□□ -2.14
HNF4AP41235 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.67□□□□□ -2.14
HNF4AP41235 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
HNF4AP41235 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
HNF4AP41235 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HNF4AP41235 Y_RNA.452-201ENST00000384202 108 ntBASIC1.66□□□□□ -2.14
HNF4AP41235 SNORA20B-201ENST00000384220 132 ntBASIC1.66□□□□□ -2.14
HNF4AP41235 RNU6-505P-201ENST00000384427 107 ntBASIC1.66□□□□□ -2.14
HNF4AP41235 RNU1-78P-201ENST00000391248 165 ntBASIC1.66□□□□□ -2.14
HNF4AP41235 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.66□□□□□ -2.14
HNF4AP41235 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.66□□□□□ -2.14
HNF4AP41235 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.66□□□□□ -2.14
HNF4AP41235 RNU6-1041P-201ENST00000516254 102 ntBASIC1.66□□□□□ -2.14
HNF4AP41235 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.66□□□□□ -2.14
HNF4AP41235 AC006380.1-201ENST00000603598 186 ntBASIC1.66□□□□□ -2.14
HNF4AP41235 AC127459.3-201ENST00000624328 466 ntBASIC1.66□□□□□ -2.14
HNF4AP41235 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.66□□□□□ -2.14
HNF4AP41235 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HNF4AP41235 RNU4-90P-201ENST00000362773 141 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 RNU6-1240P-201ENST00000365155 104 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 Y_RNA.329-201ENST00000365209 107 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 Y_RNA.383-201ENST00000383855 97 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 Y_RNA.418-201ENST00000384029 102 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 MIR1302-3-201ENST00000408128 138 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.65□□□□□ -2.15
HNF4AP41235 CYCSP49-201ENST00000420810 319 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 AC245517.4-201ENST00000448601 281 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 RNU1-98P-201ENST00000458992 160 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 Y_RNA.668-201ENST00000516233 93 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 RNU6-1338P-201ENST00000516328 91 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 RNA5SP437-201ENST00000517249 129 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 AC027419.1-201ENST00000522976 328 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 DEFB108E-201ENST00000524692 240 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 SNORA77B-201ENST00000578179 125 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 MIR3145-201ENST00000580727 82 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 MIR4298-201ENST00000584380 73 ntBASIC1.65□□□□□ -2.15
HNF4AP41235 Y_RNA.237-201ENST00000364439 102 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 Y_RNA.287-201ENST00000364853 94 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 RNU6-290P-201ENST00000365212 101 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 Y_RNA.361-201ENST00000365515 120 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 Y_RNA.569-201ENST00000384749 103 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 MIR504-201ENST00000385065 83 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 AL031003.1-201ENST00000404229 172 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 CST2P1-201ENST00000425770 87 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 MRPS10P1-201ENST00000448483 130 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 SNORD127-201ENST00000458892 86 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 AC010598.1-201ENST00000510378 103 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 AC011406.1-201ENST00000512440 370 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 RNA5SP445-201ENST00000515889 115 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 SCARNA24.2-201ENST00000516968 130 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HNF4AP41235 AC084364.2-201ENST00000546924 395 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 DEFB117-201ENST00000602356 141 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 ICE2P2-201ENST00000483823 2787 ntBASIC1.64□□□□□ -2.15
HNF4AP41235 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HNF4AP41235 Y_RNA.124-201ENST00000363339 93 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 RNU6-324P-201ENST00000363957 106 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 SNORA63D-201ENST00000364359 132 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 Y_RNA.518-201ENST00000384552 113 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 Y_RNA.556-201ENST00000384677 113 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 AL627390.1-201ENST00000396055 340 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 AL117342.1-201ENST00000404861 406 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 AC008134.1-201ENST00000420943 193 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 POLR2KP2-201ENST00000438155 177 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.63□□□□□ -2.15
HNF4AP41235 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.63□□□□□ -2.15
HNF4AP41235 AC023157.2-201ENST00000540596 141 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.63□□□□□ -2.15
HNF4AP41235 MIR8063-201ENST00000621930 81 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 AC100821.1-201ENST00000523153 2479 ntBASIC1.63□□□□□ -2.15
HNF4AP41235 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HNF4AP41235 AL391987.6-201ENST00000305671 199 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 SNORA27.1-201ENST00000362604 124 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 Y_RNA.172-201ENST00000363765 102 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 RNU6-271P-201ENST00000363858 105 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 Y_RNA.288-201ENST00000364854 92 ntBASIC1.62□□□□□ -2.15
HNF4AP41235 RNU6-702P-201ENST00000364982 107 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 273.7 ms