Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SCNN1AP37088 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SCNN1AP37088 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SCNN1AP37088 AL136360.1-201ENST00000503377 1900 ntBASIC3.35□□□□□ -1.87
SCNN1AP37088 RNU6-647P-201ENST00000364243 107 ntBASIC3.35□□□□□ -1.87
SCNN1AP37088 RNU6-805P-201ENST00000365643 106 ntBASIC3.35□□□□□ -1.87
SCNN1AP37088 MIR624-201ENST00000385217 97 ntBASIC3.35□□□□□ -1.87
SCNN1AP37088 AL117342.1-201ENST00000404861 406 ntBASIC3.35□□□□□ -1.87
SCNN1AP37088 RNU6-1186P-201ENST00000410429 97 ntBASIC3.35□□□□□ -1.87
SCNN1AP37088 NDUFA4P2-201ENST00000489989 244 ntBASIC3.35□□□□□ -1.87
SCNN1AP37088 RNA5SP217-201ENST00000515959 91 ntBASIC3.35□□□□□ -1.87
SCNN1AP37088 RNU6-781P-201ENST00000516377 101 ntBASIC3.35□□□□□ -1.87
SCNN1AP37088 SNORA18.4-201ENST00000516440 124 ntBASIC3.35□□□□□ -1.87
SCNN1AP37088 AP002004.2-201ENST00000531656 154 ntBASIC3.35□□□□□ -1.87
SCNN1AP37088 AL365205.2-201ENST00000594586 68 ntBASIC3.35□□□□□ -1.87
SCNN1AP37088 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.35□□□□□ -1.87
SCNN1AP37088 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCNN1AP37088 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
SCNN1AP37088 RNU6-147P-201ENST00000383983 107 ntBASIC3.34□□□□□ -1.87
SCNN1AP37088 SNORA7.4-201ENST00000384249 137 ntBASIC3.34□□□□□ -1.87
SCNN1AP37088 MIR891A-201ENST00000401237 79 ntBASIC3.34□□□□□ -1.87
SCNN1AP37088 RNA5SP120-201ENST00000410900 112 ntBASIC3.34□□□□□ -1.87
SCNN1AP37088 AC104389.3-201ENST00000445629 235 ntBASIC3.34□□□□□ -1.87
SCNN1AP37088 BX510359.1-201ENST00000456973 237 ntBASIC3.34□□□□□ -1.87
SCNN1AP37088 RNU6-1041P-201ENST00000516254 102 ntBASIC3.34□□□□□ -1.87
SCNN1AP37088 MIR4679-2-201ENST00000578358 77 ntBASIC3.34□□□□□ -1.87
SCNN1AP37088 MIR5195-201ENST00000583555 115 ntBASIC3.34□□□□□ -1.87
SCNN1AP37088 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.34□□□□□ -1.87
SCNN1AP37088 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.34□□□□□ -1.87
SCNN1AP37088 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.34□□□□□ -1.88
SCNN1AP37088 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCNN1AP37088 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCNN1AP37088 Y_RNA.43-201ENST00000362670 111 ntBASIC3.33□□□□□ -1.88
SCNN1AP37088 SNORD56.3-201ENST00000363507 71 ntBASIC3.33□□□□□ -1.88
SCNN1AP37088 RNU6-1072P-201ENST00000384703 107 ntBASIC3.33□□□□□ -1.88
SCNN1AP37088 RNU6-443P-201ENST00000384780 107 ntBASIC3.33□□□□□ -1.88
SCNN1AP37088 MIRLET7F2-201ENST00000385277 83 ntBASIC3.33□□□□□ -1.88
SCNN1AP37088 SNORA11.4-201ENST00000408823 129 ntBASIC3.33□□□□□ -1.88
SCNN1AP37088 RNA5SP293-201ENST00000410527 113 ntBASIC3.33□□□□□ -1.88
SCNN1AP37088 RNA5SP127-201ENST00000411051 133 ntBASIC3.33□□□□□ -1.88
SCNN1AP37088 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.33□□□□□ -1.88
SCNN1AP37088 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.33□□□□□ -1.88
SCNN1AP37088 Y_RNA.651-201ENST00000459380 103 ntBASIC3.33□□□□□ -1.88
SCNN1AP37088 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.33□□□□□ -1.88
SCNN1AP37088 MIR622-201ENST00000638396 96 ntBASIC3.33□□□□□ -1.88
SCNN1AP37088 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCNN1AP37088 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SCNN1AP37088 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCNN1AP37088 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCNN1AP37088 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.32□□□□□ -1.88
SCNN1AP37088 Y_RNA.35-201ENST00000362601 101 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 SNORD116-21-201ENST00000384507 92 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 MIR548A3-201ENST00000385297 97 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 RNA5SP323-201ENST00000391094 133 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 RPL32P35-201ENST00000415214 394 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.32□□□□□ -1.88
SCNN1AP37088 RN7SKP19-201ENST00000516016 252 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 RNU6-365P-201ENST00000517113 106 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 MIR5680-201ENST00000577577 84 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 MIR5004-201ENST00000579078 107 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 AC005786.1-201ENST00000588553 154 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 AC004832.5-201ENST00000608677 401 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.32□□□□□ -1.88
SCNN1AP37088 MIR7112-201ENST00000616126 65 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 U6.108-201ENST00000637764 58 ntBASIC3.32□□□□□ -1.88
SCNN1AP37088 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.32□□□□□ -1.88
SCNN1AP37088 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.31□□□□□ -1.88
SCNN1AP37088 SNORD114-6-201ENST00000364393 72 ntBASIC3.31□□□□□ -1.88
SCNN1AP37088 MIR1262-201ENST00000408276 93 ntBASIC3.31□□□□□ -1.88
SCNN1AP37088 RN7SL863P-201ENST00000462370 296 ntBASIC3.31□□□□□ -1.88
SCNN1AP37088 MRPS17P9-201ENST00000511924 393 ntBASIC3.31□□□□□ -1.88
SCNN1AP37088 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.31□□□□□ -1.88
SCNN1AP37088 RNU6-504P-201ENST00000516568 104 ntBASIC3.31□□□□□ -1.88
SCNN1AP37088 RNU7-28P-201ENST00000516759 62 ntBASIC3.31□□□□□ -1.88
SCNN1AP37088 RNA5SP170-201ENST00000517150 101 ntBASIC3.31□□□□□ -1.88
SCNN1AP37088 RNU1-104P-201ENST00000517280 175 ntBASIC3.31□□□□□ -1.88
SCNN1AP37088 AL022345.2-201ENST00000606307 135 ntBASIC3.31□□□□□ -1.88
SCNN1AP37088 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCNN1AP37088 SNORA1-201ENST00000384107 130 ntBASIC3.3□□□□□ -1.88
SCNN1AP37088 Y_RNA.621-201ENST00000411065 96 ntBASIC3.3□□□□□ -1.88
SCNN1AP37088 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.3□□□□□ -1.88
SCNN1AP37088 RNA5SP137-201ENST00000516833 135 ntBASIC3.3□□□□□ -1.88
SCNN1AP37088 MIR3129-201ENST00000581095 76 ntBASIC3.3□□□□□ -1.88
SCNN1AP37088 YPEL5P2-201ENST00000605553 359 ntBASIC3.3□□□□□ -1.88
SCNN1AP37088 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.3□□□□□ -1.88
SCNN1AP37088 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCNN1AP37088 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCNN1AP37088 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCNN1AP37088 RNA5SP493-201ENST00000364115 91 ntBASIC3.29□□□□□ -1.88
SCNN1AP37088 RNA5SP467-201ENST00000391274 118 ntBASIC3.29□□□□□ -1.88
SCNN1AP37088 NDUFB4P4-201ENST00000404822 243 ntBASIC3.29□□□□□ -1.88
SCNN1AP37088 AC069257.2-201ENST00000441819 155 ntBASIC3.29□□□□□ -1.88
SCNN1AP37088 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
SCNN1AP37088 AL121890.5-201ENST00000620848 304 ntBASIC3.29□□□□□ -1.88
SCNN1AP37088 AP006437.1-201ENST00000641440 3685 ntBASIC3.29□□□□□ -1.88
SCNN1AP37088 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SCNN1AP37088 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCNN1AP37088 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCNN1AP37088 AL035425.3-201ENST00000564206 4996 ntBASIC3.29□□□□□ -1.88
SCNN1AP37088 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms