Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 RNU6-1096P-201ENST00000517089 102 ntBASIC2.76□□□□□ -1.97
LTBRP36941 AC011604.1-201ENST00000545978 196 ntBASIC2.76□□□□□ -1.97
LTBRP36941 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LTBRP36941 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
LTBRP36941 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LTBRP36941 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
LTBRP36941 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LTBRP36941 RNU6-482P-201ENST00000391068 107 ntBASIC2.75□□□□□ -1.97
LTBRP36941 RNA5SP467-201ENST00000391274 118 ntBASIC2.75□□□□□ -1.97
LTBRP36941 AL606753.1-201ENST00000427435 87 ntBASIC2.75□□□□□ -1.97
LTBRP36941 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.75□□□□□ -1.97
LTBRP36941 AC245102.2-201ENST00000448956 180 ntBASIC2.75□□□□□ -1.97
LTBRP36941 RNU1-131P-201ENST00000458943 161 ntBASIC2.75□□□□□ -1.97
LTBRP36941 RN7SL442P-201ENST00000473804 320 ntBASIC2.75□□□□□ -1.97
LTBRP36941 AC108210.2-201ENST00000503681 201 ntBASIC2.75□□□□□ -1.97
LTBRP36941 RNU7-99P-201ENST00000516271 62 ntBASIC2.75□□□□□ -1.97
LTBRP36941 SNORA64.4-201ENST00000516632 81 ntBASIC2.75□□□□□ -1.97
LTBRP36941 RNA5SP380-201ENST00000517190 98 ntBASIC2.75□□□□□ -1.97
LTBRP36941 SNORA31.26-201ENST00000517250 137 ntBASIC2.75□□□□□ -1.97
LTBRP36941 DNAJC19P2-201ENST00000593340 302 ntBASIC2.75□□□□□ -1.97
LTBRP36941 AL359075.3-201ENST00000613288 217 ntBASIC2.75□□□□□ -1.97
LTBRP36941 AC012640.5-201ENST00000623897 319 ntBASIC2.75□□□□□ -1.97
LTBRP36941 MIR338-201ENST00000636369 67 ntBASIC2.75□□□□□ -1.97
LTBRP36941 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LTBRP36941 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LTBRP36941 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LTBRP36941 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LTBRP36941 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.74□□□□□ -1.97
LTBRP36941 MIR26A1-201ENST00000362205 77 ntBASIC2.74□□□□□ -1.97
LTBRP36941 RNU4-11P-201ENST00000365287 132 ntBASIC2.74□□□□□ -1.97
LTBRP36941 MIR520G-201ENST00000385064 90 ntBASIC2.74□□□□□ -1.97
LTBRP36941 MIR27B-201ENST00000385129 97 ntBASIC2.74□□□□□ -1.97
LTBRP36941 Y_RNA.621-201ENST00000411065 96 ntBASIC2.74□□□□□ -1.97
LTBRP36941 ATP5J2P3-201ENST00000451550 258 ntBASIC2.74□□□□□ -1.97
LTBRP36941 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.74□□□□□ -1.97
LTBRP36941 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.74□□□□□ -1.97
LTBRP36941 MIR2681-201ENST00000581814 105 ntBASIC2.74□□□□□ -1.97
LTBRP36941 AL021707.8-201ENST00000609428 183 ntBASIC2.74□□□□□ -1.97
LTBRP36941 AL353149.1-201ENST00000610667 244 ntBASIC2.74□□□□□ -1.97
LTBRP36941 MIR3658-201ENST00000636291 56 ntBASIC2.74□□□□□ -1.97
LTBRP36941 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LTBRP36941 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.74□□□□□ -1.97
LTBRP36941 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.74□□□□□ -1.97
LTBRP36941 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LTBRP36941 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
LTBRP36941 RNA5SP383-201ENST00000362934 120 ntBASIC2.73□□□□□ -1.97
LTBRP36941 Y_RNA.497-201ENST00000384447 98 ntBASIC2.73□□□□□ -1.97
LTBRP36941 SNORA46-201ENST00000384762 135 ntBASIC2.73□□□□□ -1.97
LTBRP36941 RNU6-131P-201ENST00000391144 107 ntBASIC2.73□□□□□ -1.97
LTBRP36941 SNORA26.7-201ENST00000391288 122 ntBASIC2.73□□□□□ -1.97
LTBRP36941 HMGN2P3-201ENST00000433603 273 ntBASIC2.73□□□□□ -1.97
LTBRP36941 HMGN2P5-201ENST00000436882 273 ntBASIC2.73□□□□□ -1.97
LTBRP36941 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.73□□□□□ -1.97
LTBRP36941 RN7SL636P-201ENST00000497504 294 ntBASIC2.73□□□□□ -1.97
LTBRP36941 RNU7-128P-201ENST00000517247 62 ntBASIC2.73□□□□□ -1.97
LTBRP36941 AC007536.1-201ENST00000533382 349 ntBASIC2.73□□□□□ -1.97
LTBRP36941 RPL23AP91-201ENST00000569211 455 ntBASIC2.73□□□□□ -1.97
LTBRP36941 AL031274.2-201ENST00000599419 203 ntBASIC2.73□□□□□ -1.97
LTBRP36941 AL049861.1-201ENST00000603130 150 ntBASIC2.73□□□□□ -1.97
LTBRP36941 U4.3-201ENST00000621047 82 ntBASIC2.73□□□□□ -1.97
LTBRP36941 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.73□□□□□ -1.97
LTBRP36941 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LTBRP36941 AC245060.5-201ENST00000610778 3293 ntBASIC2.73□□□□□ -1.97
LTBRP36941 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.72□□□□□ -1.97
LTBRP36941 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
LTBRP36941 SNORD45.3-201ENST00000363836 72 ntBASIC2.72□□□□□ -1.97
LTBRP36941 RNA5SP99-201ENST00000364020 114 ntBASIC2.72□□□□□ -1.97
LTBRP36941 RNU4-43P-201ENST00000410628 137 ntBASIC2.72□□□□□ -1.97
LTBRP36941 RNA5SP247-201ENST00000411181 105 ntBASIC2.72□□□□□ -1.97
LTBRP36941 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.72□□□□□ -1.97
LTBRP36941 SNRPGP8-201ENST00000454064 226 ntBASIC2.72□□□□□ -1.97
LTBRP36941 RNU7-26P-201ENST00000458980 63 ntBASIC2.72□□□□□ -1.97
LTBRP36941 RNU6-426P-201ENST00000516464 97 ntBASIC2.72□□□□□ -1.97
LTBRP36941 RNU1-142P-201ENST00000516682 145 ntBASIC2.72□□□□□ -1.97
LTBRP36941 RNU6-56P-201ENST00000516986 93 ntBASIC2.72□□□□□ -1.97
LTBRP36941 AC068657.1-201ENST00000520807 306 ntBASIC2.72□□□□□ -1.97
LTBRP36941 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.72□□□□□ -1.97
LTBRP36941 AC100821.1-201ENST00000523153 2479 ntBASIC2.72□□□□□ -1.97
LTBRP36941 AC026271.5-201ENST00000577873 130 ntBASIC2.72□□□□□ -1.97
LTBRP36941 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
LTBRP36941 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
LTBRP36941 MAPK10-266ENST00000641066 6555 ntBASIC2.71□□□□□ -1.98
LTBRP36941 RNU6-199P-201ENST00000362954 107 ntBASIC2.71□□□□□ -1.98
LTBRP36941 SNORD115-3-201ENST00000363100 82 ntBASIC2.71□□□□□ -1.98
LTBRP36941 SNORA33-201ENST00000363664 130 ntBASIC2.71□□□□□ -1.98
LTBRP36941 DYNLT3P1-201ENST00000378574 347 ntBASIC2.71□□□□□ -1.98
LTBRP36941 Y_RNA.521-201ENST00000384560 114 ntBASIC2.71□□□□□ -1.98
LTBRP36941 Y_RNA.568-201ENST00000384742 113 ntBASIC2.71□□□□□ -1.98
LTBRP36941 MIR569-201ENST00000385228 96 ntBASIC2.71□□□□□ -1.98
LTBRP36941 SNORD37.2-201ENST00000391075 66 ntBASIC2.71□□□□□ -1.98
LTBRP36941 RNA5SP323-201ENST00000391094 133 ntBASIC2.71□□□□□ -1.98
LTBRP36941 SNORA79-201ENST00000408376 140 ntBASIC2.71□□□□□ -1.98
LTBRP36941 AC023449.1-201ENST00000454464 154 ntBASIC2.71□□□□□ -1.98
LTBRP36941 AC233266.1-201ENST00000454518 96 ntBASIC2.71□□□□□ -1.98
LTBRP36941 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.71□□□□□ -1.98
LTBRP36941 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.71□□□□□ -1.98
LTBRP36941 RN7SKP43-201ENST00000516173 320 ntBASIC2.71□□□□□ -1.98
LTBRP36941 MIR548X2-201ENST00000579776 100 ntBASIC2.71□□□□□ -1.98
LTBRP36941 AC242852.1-201ENST00000612151 96 ntBASIC2.71□□□□□ -1.98
LTBRP36941 AC244015.1-201ENST00000622301 99 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms