Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.21□□□□□ -2.6
CLIP1P30622 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.21□□□□□ -2.6
CLIP1P30622 RNU6-344P-201ENST00000516635 111 ntBASIC-1.21□□□□□ -2.6
CLIP1P30622 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.21□□□□□ -2.6
CLIP1P30622 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.21□□□□□ -2.6
CLIP1P30622 AC010205.1-201ENST00000616668 449 ntBASIC-1.21□□□□□ -2.6
CLIP1P30622 MTND4P9-201ENST00000507819 1346 ntBASIC-1.21□□□□□ -2.6
CLIP1P30622 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.22□□□□□ -2.6
CLIP1P30622 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.22□□□□□ -2.6
CLIP1P30622 AC092447.3-201ENST00000426027 686 ntBASIC-1.22□□□□□ -2.6
CLIP1P30622 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.22□□□□□ -2.6
CLIP1P30622 RNU6-323P-201ENST00000521915 107 ntBASIC-1.22□□□□□ -2.6
CLIP1P30622 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.22□□□□□ -2.6
CLIP1P30622 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.22□□□□□ -2.6
CLIP1P30622 AC022960.3-201ENST00000619794 441 ntBASIC-1.22□□□□□ -2.6
CLIP1P30622 AC005609.4-201ENST00000625071 447 ntBASIC-1.22□□□□□ -2.6
CLIP1P30622 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 RNU4-36P-201ENST00000364294 144 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.23□□□□□ -2.61
CLIP1P30622 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 MIR518F-201ENST00000384973 87 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 RNU2-39P-201ENST00000410604 198 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 RNU2-8P-201ENST00000410727 190 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 AL031274.1-201ENST00000450334 232 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 AC093303.1-201ENST00000514549 295 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 RNU6-475P-201ENST00000516073 104 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 SCARNA17-201ENST00000516183 144 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 AL358944.1-201ENST00000528537 144 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 HIF1AP1-201ENST00000553642 175 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 AC005776.1-201ENST00000603164 290 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 U4.2-201ENST00000618561 85 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 AC006435.5-201ENST00000624486 112 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 Y_RNA.192-201ENST00000363977 102 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 RNU6-609P-201ENST00000365459 107 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 RNU6-827P-201ENST00000365553 106 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 AL117351.1-201ENST00000438864 766 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 AGGF1P4-201ENST00000568249 801 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 MIR3912-201ENST00000577566 105 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 MIR378F-201ENST00000578143 78 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 MIR6738-201ENST00000619620 64 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 AC139792.3-201ENST00000623525 224 ntBASIC-1.23□□□□□ -2.61
CLIP1P30622 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 SNORA63C-201ENST00000364578 129 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 RNU6-740P-201ENST00000364734 105 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
CLIP1P30622 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 SNRPGP10-201ENST00000432323 225 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 AC119618.1-201ENST00000434191 222 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 AL445193.1-201ENST00000441183 141 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 AL138752.1-201ENST00000452964 351 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 AL500527.2-201ENST00000454105 95 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.24□□□□□ -2.61
CLIP1P30622 MIR4762-201ENST00000585261 75 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 AL359999.1-201ENST00000604513 294 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 SNORD11B-201ENST00000607707 90 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 uc_338.19-201ENST00000616808 99 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 AC068880.4-201ENST00000623082 495 ntBASIC-1.24□□□□□ -2.61
CLIP1P30622 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.25□□□□□ -2.61
CLIP1P30622 MIR1284-201ENST00000408337 120 ntBASIC-1.25□□□□□ -2.61
CLIP1P30622 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.25□□□□□ -2.61
CLIP1P30622 RNU7-51P-201ENST00000516560 62 ntBASIC-1.25□□□□□ -2.61
CLIP1P30622 AC092574.1-201ENST00000609771 420 ntBASIC-1.25□□□□□ -2.61
CLIP1P30622 AC073343.1-201ENST00000328239 651 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 RNU6-792P-201ENST00000363490 107 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 RNU6-726P-201ENST00000364680 107 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 SNORA24.1-201ENST00000384401 135 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 MIR516B1-201ENST00000385211 90 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 RNU6-855P-201ENST00000410395 104 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 RNA5SP494-201ENST00000410653 129 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 SSR1P2-201ENST00000415208 787 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.26□□□□□ -2.61
CLIP1P30622 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.26□□□□□ -2.61
CLIP1P30622 MTCO2P11-201ENST00000431069 680 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.26□□□□□ -2.61
CLIP1P30622 RNU6-274P-201ENST00000459566 107 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.26□□□□□ -2.61
CLIP1P30622 AC010598.1-201ENST00000510378 103 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 SNORD45.4-201ENST00000516629 73 ntBASIC-1.26□□□□□ -2.61
CLIP1P30622 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.27□□□□□ -2.61
CLIP1P30622 RNU6-455P-201ENST00000384681 107 ntBASIC-1.27□□□□□ -2.61
CLIP1P30622 MIR588-201ENST00000384900 83 ntBASIC-1.27□□□□□ -2.61
CLIP1P30622 MIR487A-201ENST00000385009 80 ntBASIC-1.27□□□□□ -2.61
CLIP1P30622 SNORA75.4-201ENST00000391278 119 ntBASIC-1.27□□□□□ -2.61
CLIP1P30622 RNU4-83P-201ENST00000410863 133 ntBASIC-1.27□□□□□ -2.61
CLIP1P30622 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.27□□□□□ -2.61
CLIP1P30622 MTND1P14-201ENST00000427400 950 ntBASIC-1.27□□□□□ -2.61
CLIP1P30622 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.27□□□□□ -2.61
CLIP1P30622 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.27□□□□□ -2.61
CLIP1P30622 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.27□□□□□ -2.61
CLIP1P30622 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.27□□□□□ -2.61
CLIP1P30622 MIR4499-201ENST00000584834 69 ntBASIC-1.27□□□□□ -2.61
CLIP1P30622 MIR4791-201ENST00000607666 84 ntBASIC-1.27□□□□□ -2.61
CLIP1P30622 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.27□□□□□ -2.61
CLIP1P30622 ZNF299P-201ENST00000406845 1804 ntBASIC-1.28□□□□□ -2.61
CLIP1P30622 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms