Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.42□□□□□ -2.02
CD40P25942 RNVU1-2-201ENST00000516326 135 ntBASIC2.42□□□□□ -2.02
CD40P25942 AC084364.2-201ENST00000546924 395 ntBASIC2.42□□□□□ -2.02
CD40P25942 MIR4319-201ENST00000577285 85 ntBASIC2.42□□□□□ -2.02
CD40P25942 MIR2681-201ENST00000581814 105 ntBASIC2.42□□□□□ -2.02
CD40P25942 AL049861.1-201ENST00000603130 150 ntBASIC2.42□□□□□ -2.02
CD40P25942 AC006023.1-201ENST00000603944 259 ntBASIC2.42□□□□□ -2.02
CD40P25942 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CD40P25942 SNORA1B-201ENST00000362535 133 ntBASIC2.41□□□□□ -2.02
CD40P25942 Y_RNA.796-201ENST00000364268 102 ntBASIC2.41□□□□□ -2.02
CD40P25942 Y_RNA.799-201ENST00000364992 102 ntBASIC2.41□□□□□ -2.02
CD40P25942 MIR562-201ENST00000384894 95 ntBASIC2.41□□□□□ -2.02
CD40P25942 RNU6-1228P-201ENST00000391014 107 ntBASIC2.41□□□□□ -2.02
CD40P25942 Y_RNA.587-201ENST00000391210 103 ntBASIC2.41□□□□□ -2.02
CD40P25942 AL138827.1-201ENST00000402666 306 ntBASIC2.41□□□□□ -2.02
CD40P25942 AL603908.1-201ENST00000406098 201 ntBASIC2.41□□□□□ -2.02
CD40P25942 RNA5SP184-201ENST00000411071 108 ntBASIC2.41□□□□□ -2.02
CD40P25942 AL121914.1-201ENST00000450188 156 ntBASIC2.41□□□□□ -2.02
CD40P25942 UBE2DNL-203ENST00000474922 222 ntBASIC2.41□□□□□ -2.02
CD40P25942 RNU7-193P-201ENST00000516723 65 ntBASIC2.41□□□□□ -2.02
CD40P25942 AC079600.2-201ENST00000550076 130 ntBASIC2.41□□□□□ -2.02
CD40P25942 MIR4506-201ENST00000584693 77 ntBASIC2.41□□□□□ -2.02
CD40P25942 RPL12P50-201ENST00000603116 116 ntBASIC2.41□□□□□ -2.02
CD40P25942 AC022217.4-201ENST00000604389 163 ntBASIC2.41□□□□□ -2.02
CD40P25942 AL021707.8-201ENST00000609428 183 ntBASIC2.41□□□□□ -2.02
CD40P25942 JPX_2.1-201ENST00000614161 69 ntBASIC2.41□□□□□ -2.02
CD40P25942 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.41□□□□□ -2.02
CD40P25942 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.41□□□□□ -2.02
CD40P25942 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CD40P25942 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.4□□□□□ -2.02
CD40P25942 Y_RNA.8-201ENST00000362353 102 ntBASIC2.4□□□□□ -2.03
CD40P25942 RNU6-1019P-201ENST00000364424 107 ntBASIC2.4□□□□□ -2.03
CD40P25942 RNU6-804P-201ENST00000384286 107 ntBASIC2.4□□□□□ -2.03
CD40P25942 AC007064.1-201ENST00000412238 351 ntBASIC2.4□□□□□ -2.03
CD40P25942 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CD40P25942 AC245047.3-201ENST00000429428 127 ntBASIC2.4□□□□□ -2.03
CD40P25942 AC245047.4-201ENST00000433189 144 ntBASIC2.4□□□□□ -2.03
CD40P25942 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.4□□□□□ -2.03
CD40P25942 RNA5SP385-201ENST00000515947 110 ntBASIC2.4□□□□□ -2.03
CD40P25942 RNU6-561P-201ENST00000516222 102 ntBASIC2.4□□□□□ -2.03
CD40P25942 RNU2-56P-201ENST00000516826 190 ntBASIC2.4□□□□□ -2.03
CD40P25942 RNU6-255P-201ENST00000516957 105 ntBASIC2.4□□□□□ -2.03
CD40P25942 SNORA31.25-201ENST00000517242 134 ntBASIC2.4□□□□□ -2.03
CD40P25942 AP002004.2-201ENST00000531656 154 ntBASIC2.4□□□□□ -2.03
CD40P25942 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.4□□□□□ -2.03
CD40P25942 MIR5194-201ENST00000582634 120 ntBASIC2.4□□□□□ -2.03
CD40P25942 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.4□□□□□ -2.03
CD40P25942 ZNF861P-201ENST00000588126 639 ntBASIC2.4□□□□□ -2.03
CD40P25942 AL365434.2-201ENST00000607979 234 ntBASIC2.4□□□□□ -2.03
CD40P25942 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CD40P25942 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CD40P25942 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CD40P25942 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.39□□□□□ -2.03
CD40P25942 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CD40P25942 AC062016.1-201ENST00000355719 319 ntBASIC2.39□□□□□ -2.03
CD40P25942 Y_RNA.253-201ENST00000364562 112 ntBASIC2.39□□□□□ -2.03
CD40P25942 RNU6-728P-201ENST00000365375 104 ntBASIC2.39□□□□□ -2.03
CD40P25942 U8.9-201ENST00000365667 134 ntBASIC2.39□□□□□ -2.03
CD40P25942 MIR9-1-201ENST00000385198 89 ntBASIC2.39□□□□□ -2.03
CD40P25942 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CD40P25942 RNA5SP21-201ENST00000410917 96 ntBASIC2.39□□□□□ -2.03
CD40P25942 RNU6-1135P-201ENST00000411083 103 ntBASIC2.39□□□□□ -2.03
CD40P25942 Y_RNA.622-201ENST00000411091 108 ntBASIC2.39□□□□□ -2.03
CD40P25942 BMS1P22-201ENST00000414726 313 ntBASIC2.39□□□□□ -2.03
CD40P25942 SNORD109B-201ENST00000458961 67 ntBASIC2.39□□□□□ -2.03
CD40P25942 SNORD109A-201ENST00000459128 67 ntBASIC2.39□□□□□ -2.03
CD40P25942 RN7SL297P-201ENST00000483161 293 ntBASIC2.39□□□□□ -2.03
CD40P25942 HMGN1P7-201ENST00000491722 313 ntBASIC2.39□□□□□ -2.03
CD40P25942 RNU6-1212P-201ENST00000517023 104 ntBASIC2.39□□□□□ -2.03
CD40P25942 AL358944.1-201ENST00000528537 144 ntBASIC2.39□□□□□ -2.03
CD40P25942 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.39□□□□□ -2.03
CD40P25942 AC021753.1-201ENST00000635724 168 ntBASIC2.39□□□□□ -2.03
CD40P25942 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CD40P25942 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CD40P25942 MIR26A1-201ENST00000362205 77 ntBASIC2.38□□□□□ -2.03
CD40P25942 RNU1-112P-201ENST00000364401 164 ntBASIC2.38□□□□□ -2.03
CD40P25942 Y_RNA.357-201ENST00000365487 109 ntBASIC2.38□□□□□ -2.03
CD40P25942 Y_RNA.441-201ENST00000384123 112 ntBASIC2.38□□□□□ -2.03
CD40P25942 RNY3P5-201ENST00000384127 102 ntBASIC2.38□□□□□ -2.03
CD40P25942 MIR15B-201ENST00000385045 98 ntBASIC2.38□□□□□ -2.03
CD40P25942 SNORA48.1-201ENST00000390879 135 ntBASIC2.38□□□□□ -2.03
CD40P25942 RNA5SP501-201ENST00000410990 112 ntBASIC2.38□□□□□ -2.03
CD40P25942 SNRPGP10-201ENST00000432323 225 ntBASIC2.38□□□□□ -2.03
CD40P25942 RPS27P1-201ENST00000450552 247 ntBASIC2.38□□□□□ -2.03
CD40P25942 AC023449.1-201ENST00000454464 154 ntBASIC2.38□□□□□ -2.03
CD40P25942 SNORD11-201ENST00000459124 84 ntBASIC2.38□□□□□ -2.03
CD40P25942 AL049830.1-201ENST00000468034 425 ntBASIC2.38□□□□□ -2.03
CD40P25942 MIR3162-201ENST00000581818 82 ntBASIC2.38□□□□□ -2.03
CD40P25942 MIR4672-201ENST00000583126 81 ntBASIC2.38□□□□□ -2.03
CD40P25942 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.37□□□□□ -2.03
CD40P25942 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CD40P25942 RNU6-859P-201ENST00000362728 107 ntBASIC2.37□□□□□ -2.03
CD40P25942 Y_RNA.272-201ENST00000364696 102 ntBASIC2.37□□□□□ -2.03
CD40P25942 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CD40P25942 RNU2-52P-201ENST00000410680 190 ntBASIC2.37□□□□□ -2.03
CD40P25942 RNU6-394P-201ENST00000410735 107 ntBASIC2.37□□□□□ -2.03
CD40P25942 RNA5SP450-201ENST00000411206 102 ntBASIC2.37□□□□□ -2.03
CD40P25942 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.37□□□□□ -2.03
CD40P25942 AP004217.1-201ENST00000480579 346 ntBASIC2.37□□□□□ -2.03
CD40P25942 MIR4529-201ENST00000578110 78 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms