Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 RNU6-1201P-201ENST00000384227 107 ntBASIC4.21□□□□□ -1.74
PTPREP23469 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPREP23469 AC093259.1-201ENST00000509755 300 ntBASIC4.21□□□□□ -1.74
PTPREP23469 RNA5SP112-201ENST00000515937 99 ntBASIC4.21□□□□□ -1.74
PTPREP23469 RN7SKP57-201ENST00000517248 293 ntBASIC4.21□□□□□ -1.74
PTPREP23469 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPREP23469 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.74
PTPREP23469 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPREP23469 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PTPREP23469 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPREP23469 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
PTPREP23469 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPREP23469 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPREP23469 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTPREP23469 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPREP23469 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPREP23469 RPL32P35-201ENST00000415214 394 ntBASIC4.2□□□□□ -1.74
PTPREP23469 AL049830.1-201ENST00000468034 425 ntBASIC4.2□□□□□ -1.74
PTPREP23469 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.2□□□□□ -1.74
PTPREP23469 AC008011.1-201ENST00000545989 227 ntBASIC4.2□□□□□ -1.74
PTPREP23469 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPREP23469 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PTPREP23469 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPREP23469 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPREP23469 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPREP23469 SNORA1B-201ENST00000362535 133 ntBASIC4.19□□□□□ -1.74
PTPREP23469 SNORD68-201ENST00000363214 84 ntBASIC4.19□□□□□ -1.74
PTPREP23469 RNU1-33P-201ENST00000364249 162 ntBASIC4.19□□□□□ -1.74
PTPREP23469 SNORD58A-201ENST00000383875 65 ntBASIC4.19□□□□□ -1.74
PTPREP23469 Y_RNA.565-201ENST00000384719 101 ntBASIC4.19□□□□□ -1.74
PTPREP23469 AC087499.4-201ENST00000448505 178 ntBASIC4.19□□□□□ -1.74
PTPREP23469 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPREP23469 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.19□□□□□ -1.74
PTPREP23469 ELOCP29-201ENST00000588193 334 ntBASIC4.19□□□□□ -1.74
PTPREP23469 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTPREP23469 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTPREP23469 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPREP23469 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTPREP23469 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTPREP23469 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPREP23469 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPREP23469 RNU6-1084P-201ENST00000362498 107 ntBASIC4.18□□□□□ -1.74
PTPREP23469 snoU2-30.2-201ENST00000362805 70 ntBASIC4.18□□□□□ -1.74
PTPREP23469 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPREP23469 RNA5SP467-201ENST00000391274 118 ntBASIC4.18□□□□□ -1.74
PTPREP23469 AL627390.1-201ENST00000396055 340 ntBASIC4.18□□□□□ -1.74
PTPREP23469 SNORA11.2-201ENST00000408318 127 ntBASIC4.18□□□□□ -1.74
PTPREP23469 RNA5SP120-201ENST00000410900 112 ntBASIC4.18□□□□□ -1.74
PTPREP23469 VWA8P1-201ENST00000510889 176 ntBASIC4.18□□□□□ -1.74
PTPREP23469 RNU6-1006P-201ENST00000516998 103 ntBASIC4.18□□□□□ -1.74
PTPREP23469 MIR8058-201ENST00000615737 89 ntBASIC4.18□□□□□ -1.74
PTPREP23469 AP000553.6-201ENST00000641242 118 ntBASIC4.18□□□□□ -1.74
PTPREP23469 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPREP23469 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPREP23469 ICE2P2-201ENST00000483823 2787 ntBASIC4.18□□□□□ -1.74
PTPREP23469 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
PTPREP23469 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPREP23469 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPREP23469 AC008264.2-201ENST00000610193 3731 ntBASIC4.17□□□□□ -1.74
PTPREP23469 RNA5SP42-201ENST00000364278 115 ntBASIC4.17□□□□□ -1.74
PTPREP23469 U8.15-201ENST00000390947 134 ntBASIC4.17□□□□□ -1.74
PTPREP23469 AL035398.1-201ENST00000430869 322 ntBASIC4.17□□□□□ -1.74
PTPREP23469 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPREP23469 SNORA31.21-201ENST00000517180 77 ntBASIC4.17□□□□□ -1.74
PTPREP23469 MIR7851-201ENST00000610611 160 ntBASIC4.17□□□□□ -1.74
PTPREP23469 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.17□□□□□ -1.74
PTPREP23469 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPREP23469 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PTPREP23469 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PTPREP23469 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
PTPREP23469 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPREP23469 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPREP23469 Y_RNA.299-201ENST00000364973 94 ntBASIC4.16□□□□□ -1.74
PTPREP23469 MIR634-201ENST00000385208 97 ntBASIC4.16□□□□□ -1.74
PTPREP23469 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PTPREP23469 RNU4-69P-201ENST00000410677 143 ntBASIC4.16□□□□□ -1.74
PTPREP23469 AC115115.1-201ENST00000449927 248 ntBASIC4.16□□□□□ -1.74
PTPREP23469 SNORA31.4-201ENST00000516049 129 ntBASIC4.16□□□□□ -1.74
PTPREP23469 SNORA70.18-201ENST00000516696 98 ntBASIC4.16□□□□□ -1.74
PTPREP23469 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPREP23469 MIR4738-201ENST00000579134 87 ntBASIC4.16□□□□□ -1.74
PTPREP23469 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
PTPREP23469 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTPREP23469 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PTPREP23469 snoU2-30.1-201ENST00000365012 70 ntBASIC4.15□□□□□ -1.75
PTPREP23469 Y_RNA.430-201ENST00000384081 110 ntBASIC4.15□□□□□ -1.75
PTPREP23469 RNU6-616P-201ENST00000384353 107 ntBASIC4.15□□□□□ -1.75
PTPREP23469 RNA5SP252-201ENST00000391131 119 ntBASIC4.15□□□□□ -1.75
PTPREP23469 RNA5SP38-201ENST00000410750 119 ntBASIC4.15□□□□□ -1.75
PTPREP23469 AC123900.1-201ENST00000420390 96 ntBASIC4.15□□□□□ -1.75
PTPREP23469 AC005326.1-201ENST00000429197 123 ntBASIC4.15□□□□□ -1.75
PTPREP23469 AC107083.1-201ENST00000439643 279 ntBASIC4.15□□□□□ -1.75
PTPREP23469 PHBP14-201ENST00000512887 367 ntBASIC4.15□□□□□ -1.75
PTPREP23469 AP002004.2-201ENST00000531656 154 ntBASIC4.15□□□□□ -1.75
PTPREP23469 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPREP23469 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPREP23469 AC021613.1-201ENST00000623880 111 ntBASIC4.15□□□□□ -1.75
PTPREP23469 CEP170P1-201ENST00000502249 4587 ntBASIC4.15□□□□□ -1.75
PTPREP23469 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTPREP23469 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms