Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
H2AFXP16104 RNU6-699P-201ENST00000517081 110 ntBASIC0.98□□□□□ -2.25
H2AFXP16104 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.98□□□□□ -2.25
H2AFXP16104 AC005730.3-201ENST00000583067 366 ntBASIC0.98□□□□□ -2.25
H2AFXP16104 FAM106DP-201ENST00000586416 501 ntBASIC0.98□□□□□ -2.25
H2AFXP16104 AC005176.2-201ENST00000596933 147 ntBASIC0.98□□□□□ -2.25
H2AFXP16104 AC006380.1-201ENST00000603598 186 ntBASIC0.98□□□□□ -2.25
H2AFXP16104 MIR6078-201ENST00000611069 100 ntBASIC0.98□□□□□ -2.25
H2AFXP16104 U2.1-201ENST00000618978 145 ntBASIC0.98□□□□□ -2.25
H2AFXP16104 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.98□□□□□ -2.25
H2AFXP16104 RNU6-626P-201ENST00000363354 107 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 Y_RNA.142-201ENST00000363491 102 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 SNORA2.2-201ENST00000365473 135 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 RNU6-163P-201ENST00000384396 106 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 RNU6-1297P-201ENST00000384415 104 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 SNORD116-29-201ENST00000384516 83 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 MIR559-201ENST00000385188 96 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 MIR628-201ENST00000385229 95 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 MIR764-201ENST00000390811 85 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 SNORA17.3-201ENST00000391159 129 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.97□□□□□ -2.25
H2AFXP16104 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.97□□□□□ -2.25
H2AFXP16104 CHEK2P4-201ENST00000450340 246 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 PRDX4P1-201ENST00000507189 574 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 RNU6-322P-201ENST00000516010 103 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 RNU6-277P-201ENST00000516272 106 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 RNU6-155P-201ENST00000516347 100 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 MIR4659A-201ENST00000580269 81 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 AC240442.1-201ENST00000616055 283 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 MIR1302-1-201ENST00000637932 143 ntBASIC0.97□□□□□ -2.25
H2AFXP16104 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.97□□□□□ -2.25
H2AFXP16104 Y_RNA.361-201ENST00000365515 120 ntBASIC0.96□□□□□ -2.26
H2AFXP16104 Y_RNA.363-201ENST00000365529 113 ntBASIC0.96□□□□□ -2.26
H2AFXP16104 RNY3P4-201ENST00000384428 101 ntBASIC0.96□□□□□ -2.26
H2AFXP16104 SNORD78.2-201ENST00000391076 69 ntBASIC0.96□□□□□ -2.26
H2AFXP16104 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.96□□□□□ -2.26
H2AFXP16104 RNU2-54P-201ENST00000410299 190 ntBASIC0.96□□□□□ -2.26
H2AFXP16104 AL162725.1-201ENST00000435405 301 ntBASIC0.96□□□□□ -2.26
H2AFXP16104 SUMO1P2-201ENST00000452524 304 ntBASIC0.96□□□□□ -2.26
H2AFXP16104 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.96□□□□□ -2.26
H2AFXP16104 HSPE1P19-201ENST00000603327 295 ntBASIC0.96□□□□□ -2.26
H2AFXP16104 AC025253.1-201ENST00000613623 543 ntBASIC0.96□□□□□ -2.26
H2AFXP16104 AL591926.4-201ENST00000616895 298 ntBASIC0.96□□□□□ -2.26
H2AFXP16104 AC138305.3-201ENST00000624988 240 ntBASIC0.96□□□□□ -2.26
H2AFXP16104 RNU4-79P-201ENST00000362764 141 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 RNU6-1283P-201ENST00000365314 105 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 Y_RNA.446-201ENST00000384178 104 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 RNY4P36-201ENST00000391116 96 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 MIR891A-201ENST00000401237 79 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 SNORA11.2-201ENST00000408318 127 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 RNU6-1199P-201ENST00000411249 104 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 AC108667.1-201ENST00000428618 249 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.95□□□□□ -2.26
H2AFXP16104 AC245047.7-201ENST00000440265 293 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 AC114811.1-201ENST00000507207 168 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 SNORA31.4-201ENST00000516049 129 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 RNU6-1012P-201ENST00000516606 109 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 AC120024.3-201ENST00000603167 156 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 AC133104.2-201ENST00000615272 193 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 AC084781.2-201ENST00000615568 161 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 AL008636.1-201ENST00000625038 1018 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 U6.92-201ENST00000636464 89 ntBASIC0.95□□□□□ -2.26
H2AFXP16104 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
H2AFXP16104 MIR378A-201ENST00000362177 66 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 Y_RNA.387-201ENST00000383918 102 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 SNORA70.7-201ENST00000384159 133 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 MIR146A-201ENST00000385201 99 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 MLLT10P1-201ENST00000418346 262 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 AC087343.1-201ENST00000477341 475 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 SNORA25.10-201ENST00000515926 124 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 SNORA70.12-201ENST00000516084 153 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 Y_RNA.718-201ENST00000517110 102 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 AL358944.1-201ENST00000528537 144 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 AC011604.1-201ENST00000545978 196 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 AC006600.1-201ENST00000572529 153 ntBASIC0.94□□□□□ -2.26
H2AFXP16104 AL391987.6-201ENST00000305671 199 ntBASIC0.93□□□□□ -2.26
H2AFXP16104 SNORD114-7-201ENST00000362520 77 ntBASIC0.93□□□□□ -2.26
H2AFXP16104 RNU6-490P-201ENST00000362985 107 ntBASIC0.93□□□□□ -2.26
H2AFXP16104 Y_RNA.140-201ENST00000363474 103 ntBASIC0.93□□□□□ -2.26
H2AFXP16104 Y_RNA.384-201ENST00000383909 102 ntBASIC0.93□□□□□ -2.26
H2AFXP16104 MIR516B2-201ENST00000385190 85 ntBASIC0.93□□□□□ -2.26
H2AFXP16104 RNU6-1054P-201ENST00000411293 104 ntBASIC0.93□□□□□ -2.26
H2AFXP16104 RPL39P39-201ENST00000455840 151 ntBASIC0.93□□□□□ -2.26
H2AFXP16104 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
H2AFXP16104 RNU6-436P-201ENST00000516171 114 ntBASIC0.93□□□□□ -2.26
H2AFXP16104 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.93□□□□□ -2.26
H2AFXP16104 AC004832.4-201ENST00000608952 331 ntBASIC0.93□□□□□ -2.26
H2AFXP16104 AL132765.2-201ENST00000610812 351 ntBASIC0.93□□□□□ -2.26
H2AFXP16104 AL096861.1-201ENST00000610899 123 ntBASIC0.93□□□□□ -2.26
H2AFXP16104 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.92□□□□□ -2.26
H2AFXP16104 RNU2-61P-201ENST00000411069 191 ntBASIC0.92□□□□□ -2.26
H2AFXP16104 AP1B1P2-201ENST00000416196 106 ntBASIC0.92□□□□□ -2.26
H2AFXP16104 BTF3P4-201ENST00000418852 495 ntBASIC0.92□□□□□ -2.26
H2AFXP16104 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.92□□□□□ -2.26
H2AFXP16104 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.92□□□□□ -2.26
H2AFXP16104 AC093019.1-201ENST00000443135 252 ntBASIC0.92□□□□□ -2.26
H2AFXP16104 SNORD124-201ENST00000459577 104 ntBASIC0.92□□□□□ -2.26
H2AFXP16104 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.92□□□□□ -2.26
H2AFXP16104 CYCTP-201ENST00000504253 315 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms