Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.7□□□□□ -2.84
TOP2AP11388 RNU6-1240P-201ENST00000365155 104 ntBASIC-2.7□□□□□ -2.84
TOP2AP11388 SNORD24-201ENST00000383884 75 ntBASIC-2.7□□□□□ -2.84
TOP2AP11388 RNU6-1036P-201ENST00000383959 104 ntBASIC-2.7□□□□□ -2.84
TOP2AP11388 RNU2-56P-201ENST00000516826 190 ntBASIC-2.7□□□□□ -2.84
TOP2AP11388 AC022784.5-201ENST00000522241 437 ntBASIC-2.7□□□□□ -2.84
TOP2AP11388 RNU6-543P-201ENST00000362576 108 ntBASIC-2.71□□□□□ -2.84
TOP2AP11388 RNU6-740P-201ENST00000364734 105 ntBASIC-2.71□□□□□ -2.84
TOP2AP11388 PIGPP3-201ENST00000425307 415 ntBASIC-2.71□□□□□ -2.84
TOP2AP11388 AF186996.7-201ENST00000492781 209 ntBASIC-2.71□□□□□ -2.84
TOP2AP11388 SUMO1P1-201ENST00000497904 306 ntBASIC-2.71□□□□□ -2.84
TOP2AP11388 RNU6-118P-201ENST00000516552 102 ntBASIC-2.71□□□□□ -2.84
TOP2AP11388 SLC2A13P1-201ENST00000531560 322 ntBASIC-2.71□□□□□ -2.84
TOP2AP11388 RNU6-1339P-201ENST00000363574 91 ntBASIC-2.72□□□□□ -2.84
TOP2AP11388 RNU6-354P-201ENST00000383862 107 ntBASIC-2.72□□□□□ -2.84
TOP2AP11388 RNU6-610P-201ENST00000384264 107 ntBASIC-2.72□□□□□ -2.84
TOP2AP11388 AC087894.1-201ENST00000538359 518 ntBASIC-2.72□□□□□ -2.84
TOP2AP11388 RNA5SP86-201ENST00000390869 98 ntBASIC-2.73□□□□□ -2.85
TOP2AP11388 CEP57L1P1-201ENST00000430943 1201 ntBASIC-2.73□□□□□ -2.85
TOP2AP11388 SNORA43.2-201ENST00000516652 128 ntBASIC-2.73□□□□□ -2.85
TOP2AP11388 MIR548AR-201ENST00000582191 57 ntBASIC-2.73□□□□□ -2.85
TOP2AP11388 RNA5SP93-201ENST00000362525 114 ntBASIC-2.73□□□□□ -2.85
TOP2AP11388 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.73□□□□□ -2.85
TOP2AP11388 RNU6-1029P-201ENST00000384109 107 ntBASIC-2.73□□□□□ -2.85
TOP2AP11388 RNU6-378P-201ENST00000384324 107 ntBASIC-2.73□□□□□ -2.85
TOP2AP11388 MIR15B-201ENST00000385045 98 ntBASIC-2.73□□□□□ -2.85
TOP2AP11388 RNU6-416P-201ENST00000516265 103 ntBASIC-2.73□□□□□ -2.85
TOP2AP11388 AC073648.5-201ENST00000603502 305 ntBASIC-2.73□□□□□ -2.85
TOP2AP11388 AL049777.1-201ENST00000622740 518 ntBASIC-2.73□□□□□ -2.85
TOP2AP11388 Y_RNA.172-201ENST00000363765 102 ntBASIC-2.74□□□□□ -2.85
TOP2AP11388 AC108059.2-201ENST00000434626 151 ntBASIC-2.74□□□□□ -2.85
TOP2AP11388 AL512286.1-201ENST00000439244 400 ntBASIC-2.74□□□□□ -2.85
TOP2AP11388 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-2.74□□□□□ -2.85
TOP2AP11388 RNU2-11P-201ENST00000459191 187 ntBASIC-2.74□□□□□ -2.85
TOP2AP11388 RPL39P36-201ENST00000490784 156 ntBASIC-2.74□□□□□ -2.85
TOP2AP11388 SNORA31.3-201ENST00000516029 96 ntBASIC-2.74□□□□□ -2.85
TOP2AP11388 AC023538.1-201ENST00000534576 736 ntBASIC-2.74□□□□□ -2.85
TOP2AP11388 MIR5704-201ENST00000584029 77 ntBASIC-2.74□□□□□ -2.85
TOP2AP11388 SGO1P1-201ENST00000603525 1447 ntBASIC-2.75□□□□□ -2.85
TOP2AP11388 RNU6-511P-201ENST00000363496 107 ntBASIC-2.75□□□□□ -2.85
TOP2AP11388 RNU6-865P-201ENST00000364772 107 ntBASIC-2.75□□□□□ -2.85
TOP2AP11388 Y_RNA.446-201ENST00000384178 104 ntBASIC-2.75□□□□□ -2.85
TOP2AP11388 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-2.75□□□□□ -2.85
TOP2AP11388 AL358934.1-201ENST00000432346 324 ntBASIC-2.75□□□□□ -2.85
TOP2AP11388 NDUFA5P7-201ENST00000452914 242 ntBASIC-2.75□□□□□ -2.85
TOP2AP11388 RNY4-201ENST00000516507 96 ntBASIC-2.75□□□□□ -2.85
TOP2AP11388 AC025647.1-201ENST00000517879 253 ntBASIC-2.75□□□□□ -2.85
TOP2AP11388 AC011374.2-201ENST00000607135 526 ntBASIC-2.75□□□□□ -2.85
TOP2AP11388 MIR8068-201ENST00000618032 68 ntBASIC-2.75□□□□□ -2.85
TOP2AP11388 RNU6-562P-201ENST00000362731 107 ntBASIC-2.76□□□□□ -2.85
TOP2AP11388 RNU6-1062P-201ENST00000383908 107 ntBASIC-2.76□□□□□ -2.85
TOP2AP11388 MTND1P21-201ENST00000412991 285 ntBASIC-2.76□□□□□ -2.85
TOP2AP11388 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-2.76□□□□□ -2.85
TOP2AP11388 AC026585.1-201ENST00000619582 524 ntBASIC-2.76□□□□□ -2.85
TOP2AP11388 MIR539-201ENST00000365690 78 ntBASIC-2.77□□□□□ -2.85
TOP2AP11388 AC117470.1-201ENST00000381974 330 ntBASIC-2.77□□□□□ -2.85
TOP2AP11388 RNU6-535P-201ENST00000384722 107 ntBASIC-2.77□□□□□ -2.85
TOP2AP11388 AC104576.1-201ENST00000524225 88 ntBASIC-2.77□□□□□ -2.85
TOP2AP11388 AC120024.3-201ENST00000603167 156 ntBASIC-2.77□□□□□ -2.85
TOP2AP11388 AC144521.1-201ENST00000607148 956 ntBASIC-2.77□□□□□ -2.85
TOP2AP11388 MIR6740-201ENST00000618268 113 ntBASIC-2.77□□□□□ -2.85
TOP2AP11388 RNU6-1115P-201ENST00000362490 106 ntBASIC-2.78□□□□□ -2.85
TOP2AP11388 RNU6-1066P-201ENST00000363573 105 ntBASIC-2.78□□□□□ -2.85
TOP2AP11388 RNU6-1175P-201ENST00000365200 107 ntBASIC-2.78□□□□□ -2.85
TOP2AP11388 RNU4-83P-201ENST00000410863 133 ntBASIC-2.78□□□□□ -2.85
TOP2AP11388 MTCO3P17-201ENST00000443775 513 ntBASIC-2.78□□□□□ -2.85
TOP2AP11388 UQCRBP2-201ENST00000447827 297 ntBASIC-2.78□□□□□ -2.85
TOP2AP11388 RPS29P24-201ENST00000486345 171 ntBASIC-2.78□□□□□ -2.85
TOP2AP11388 AC087883.1-201ENST00000551882 391 ntBASIC-2.78□□□□□ -2.85
TOP2AP11388 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-2.78□□□□□ -2.85
TOP2AP11388 AC090615.1-201ENST00000577519 154 ntBASIC-2.78□□□□□ -2.85
TOP2AP11388 AC018714.1-201ENST00000605028 208 ntBASIC-2.78□□□□□ -2.85
TOP2AP11388 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-2.78□□□□□ -2.85
TOP2AP11388 MIR29B1-201ENST00000385015 81 ntBASIC-2.78□□□□□ -2.86
TOP2AP11388 RNU4-61P-201ENST00000411243 107 ntBASIC-2.78□□□□□ -2.86
TOP2AP11388 AC074085.1-201ENST00000413598 418 ntBASIC-2.78□□□□□ -2.86
TOP2AP11388 AL158053.1-201ENST00000441503 453 ntBASIC-2.78□□□□□ -2.86
TOP2AP11388 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.78□□□□□ -2.86
TOP2AP11388 RNU6-412P-201ENST00000516434 106 ntBASIC-2.78□□□□□ -2.86
TOP2AP11388 RNU6-980P-201ENST00000516925 103 ntBASIC-2.78□□□□□ -2.86
TOP2AP11388 AL020997.3-201ENST00000602843 359 ntBASIC-2.78□□□□□ -2.86
TOP2AP11388 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-2.79□□□□□ -2.86
TOP2AP11388 RNU6-509P-201ENST00000363519 107 ntBASIC-2.79□□□□□ -2.86
TOP2AP11388 COX7BP2-201ENST00000437976 242 ntBASIC-2.79□□□□□ -2.86
TOP2AP11388 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-2.79□□□□□ -2.86
TOP2AP11388 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-2.79□□□□□ -2.86
TOP2AP11388 AL133255.1-201ENST00000606374 441 ntBASIC-2.79□□□□□ -2.86
TOP2AP11388 SNORA1B-201ENST00000362535 133 ntBASIC-2.8□□□□□ -2.86
TOP2AP11388 SNORA2.1-201ENST00000363089 137 ntBASIC-2.8□□□□□ -2.86
TOP2AP11388 RNU6-704P-201ENST00000364162 103 ntBASIC-2.8□□□□□ -2.86
TOP2AP11388 RNU6-905P-201ENST00000384434 107 ntBASIC-2.8□□□□□ -2.86
TOP2AP11388 MTATP6P17-201ENST00000431030 672 ntBASIC-2.8□□□□□ -2.86
TOP2AP11388 RNU7-57P-201ENST00000459540 60 ntBASIC-2.8□□□□□ -2.86
TOP2AP11388 AC112206.4-201ENST00000515142 405 ntBASIC-2.8□□□□□ -2.86
TOP2AP11388 RNU6-58P-201ENST00000517143 103 ntBASIC-2.8□□□□□ -2.86
TOP2AP11388 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-2.8□□□□□ -2.86
TOP2AP11388 MIR544B-201ENST00000582372 78 ntBASIC-2.8□□□□□ -2.86
TOP2AP11388 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-2.8□□□□□ -2.86
TOP2AP11388 MIR6818-201ENST00000621576 65 ntBASIC-2.8□□□□□ -2.86
TOP2AP11388 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-2.81□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms