Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
POLR3DP05423 FAM35CP-201ENST00000554755 2470 ntBASIC3.32□□□□□ -1.88
POLR3DP05423 RNU6-915P-201ENST00000364943 103 ntBASIC3.32□□□□□ -1.88
POLR3DP05423 RNU6-1138P-201ENST00000365359 106 ntBASIC3.32□□□□□ -1.88
POLR3DP05423 RNU6-136P-201ENST00000384663 107 ntBASIC3.32□□□□□ -1.88
POLR3DP05423 MIR562-201ENST00000384894 95 ntBASIC3.32□□□□□ -1.88
POLR3DP05423 RNA5SP184-201ENST00000411071 108 ntBASIC3.32□□□□□ -1.88
POLR3DP05423 AC003685.2-201ENST00000422795 395 ntBASIC3.32□□□□□ -1.88
POLR3DP05423 RPL23AP91-201ENST00000569211 455 ntBASIC3.32□□□□□ -1.88
POLR3DP05423 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
POLR3DP05423 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR3DP05423 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.32□□□□□ -1.88
POLR3DP05423 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
POLR3DP05423 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR3DP05423 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
POLR3DP05423 RNU6-1209P-201ENST00000363655 107 ntBASIC3.31□□□□□ -1.88
POLR3DP05423 RNY1P11-201ENST00000363759 113 ntBASIC3.31□□□□□ -1.88
POLR3DP05423 RNU1-112P-201ENST00000364401 164 ntBASIC3.31□□□□□ -1.88
POLR3DP05423 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
POLR3DP05423 AL138827.1-201ENST00000402666 306 ntBASIC3.31□□□□□ -1.88
POLR3DP05423 RNU2-52P-201ENST00000410680 190 ntBASIC3.31□□□□□ -1.88
POLR3DP05423 AC060773.1-201ENST00000421698 310 ntBASIC3.31□□□□□ -1.88
POLR3DP05423 AL353689.1-201ENST00000438895 199 ntBASIC3.31□□□□□ -1.88
POLR3DP05423 AC108938.1-201ENST00000451204 136 ntBASIC3.31□□□□□ -1.88
POLR3DP05423 SNORD109B-201ENST00000458961 67 ntBASIC3.31□□□□□ -1.88
POLR3DP05423 SNORD109A-201ENST00000459128 67 ntBASIC3.31□□□□□ -1.88
POLR3DP05423 RNU6-991P-201ENST00000516168 107 ntBASIC3.31□□□□□ -1.88
POLR3DP05423 Y_RNA.686-201ENST00000516548 134 ntBASIC3.31□□□□□ -1.88
POLR3DP05423 AC062016.1-201ENST00000355719 319 ntBASIC3.3□□□□□ -1.88
POLR3DP05423 Y_RNA.120-201ENST00000363304 110 ntBASIC3.3□□□□□ -1.88
POLR3DP05423 RNU6-743P-201ENST00000364151 106 ntBASIC3.3□□□□□ -1.88
POLR3DP05423 Y_RNA.634-201ENST00000364811 113 ntBASIC3.3□□□□□ -1.88
POLR3DP05423 RNU7-99P-201ENST00000516271 62 ntBASIC3.3□□□□□ -1.88
POLR3DP05423 Y_RNA.712-201ENST00000517011 92 ntBASIC3.3□□□□□ -1.88
POLR3DP05423 AC090049.2-201ENST00000550377 109 ntBASIC3.3□□□□□ -1.88
POLR3DP05423 Y_RNA.757-201ENST00000578934 114 ntBASIC3.3□□□□□ -1.88
POLR3DP05423 MIR4672-201ENST00000583126 81 ntBASIC3.3□□□□□ -1.88
POLR3DP05423 ZNF861P-201ENST00000588126 639 ntBASIC3.3□□□□□ -1.88
POLR3DP05423 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
POLR3DP05423 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
POLR3DP05423 snoU2-30.2-201ENST00000362805 70 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 RNU2-70P-201ENST00000410718 179 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 SRIP3-201ENST00000413200 219 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 HMGN2P34-201ENST00000437647 269 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 RPL39P40-201ENST00000445481 146 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR3DP05423 OR9P1P-201ENST00000496431 281 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 RNU6-919P-201ENST00000516731 104 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 RNU6-1096P-201ENST00000517089 102 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 MIR4298-201ENST00000584380 73 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 AC007229.1-201ENST00000590455 412 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 AL355297.2-201ENST00000604792 129 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 AC004832.5-201ENST00000608677 401 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 AL353149.1-201ENST00000610667 244 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.29□□□□□ -1.88
POLR3DP05423 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
POLR3DP05423 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.29□□□□□ -1.88
POLR3DP05423 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.29□□□□□ -1.88
POLR3DP05423 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
POLR3DP05423 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.28□□□□□ -1.88
POLR3DP05423 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.28□□□□□ -1.88
POLR3DP05423 AL109933.2-201ENST00000452651 260 ntBASIC3.28□□□□□ -1.88
POLR3DP05423 AC018868.1-201ENST00000491307 315 ntBASIC3.28□□□□□ -1.88
POLR3DP05423 AC011406.1-201ENST00000512440 370 ntBASIC3.28□□□□□ -1.88
POLR3DP05423 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.28□□□□□ -1.88
POLR3DP05423 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.28□□□□□ -1.88
POLR3DP05423 MIR3162-201ENST00000581818 82 ntBASIC3.28□□□□□ -1.88
POLR3DP05423 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
POLR3DP05423 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
POLR3DP05423 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
POLR3DP05423 SNORD21-201ENST00000383953 95 ntBASIC3.27□□□□□ -1.89
POLR3DP05423 MIR196B-201ENST00000384852 84 ntBASIC3.27□□□□□ -1.89
POLR3DP05423 RNU6-220P-201ENST00000390919 107 ntBASIC3.27□□□□□ -1.89
POLR3DP05423 AL358944.1-201ENST00000528537 144 ntBASIC3.27□□□□□ -1.89
POLR3DP05423 AC131055.1-201ENST00000584626 316 ntBASIC3.27□□□□□ -1.89
POLR3DP05423 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
POLR3DP05423 AL136360.1-201ENST00000503377 1900 ntBASIC3.27□□□□□ -1.89
POLR3DP05423 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.26□□□□□ -1.89
POLR3DP05423 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
POLR3DP05423 MIR592-201ENST00000384959 97 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 RNA5SP21-201ENST00000410917 96 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 AL513477.1-202ENST00000417061 214 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 RPS15AP28-201ENST00000435088 386 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.26□□□□□ -1.89
POLR3DP05423 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.26□□□□□ -1.89
POLR3DP05423 RNU1-131P-201ENST00000458943 161 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 Y_RNA.692-201ENST00000516627 105 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 RNU7-149P-201ENST00000516739 59 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 AC091178.2-201ENST00000584401 117 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 AC073413.2-201ENST00000604332 360 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 JPX_2.1-201ENST00000614161 69 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
POLR3DP05423 AC138915.1-201ENST00000565427 1685 ntBASIC3.26□□□□□ -1.89
POLR3DP05423 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
POLR3DP05423 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR3DP05423 Y_RNA.91-201ENST00000363042 107 ntBASIC3.25□□□□□ -1.89
POLR3DP05423 Y_RNA.99-201ENST00000363138 105 ntBASIC3.25□□□□□ -1.89
POLR3DP05423 Y_RNA.280-201ENST00000364765 112 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms