Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC080078.3-201ENST00000605407 463 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 SNORD114-21-201ENST00000606412 72 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 SNORD114-7-201ENST00000362520 77 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.172-201ENST00000363765 102 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.361-201ENST00000365515 120 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 RNU6-890P-201ENST00000384121 107 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 SNORA75.6-201ENST00000391318 127 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 PIGPP3-201ENST00000425307 415 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 MTND1P2-201ENST00000430604 821 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 AC002429.1-201ENST00000437672 148 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 RPS4XP11-201ENST00000446897 772 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 MTCO3P10-201ENST00000455912 772 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 ELOCP24-201ENST00000456370 334 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 COX6CP14-201ENST00000469580 174 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 RPS26P48-201ENST00000491713 339 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 RNU6-322P-201ENST00000516010 103 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 SNORA31.4-201ENST00000516049 129 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 RNU6-264P-201ENST00000517134 104 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 FAM106DP-201ENST00000586416 501 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 AC013244.2-201ENST00000603396 103 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 U6atac.1-201ENST00000616025 117 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 AC022306.2-201ENST00000617563 647 ntBASIC0.72□□□□□ -2.29
HLA-DQA1P01909 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HLA-DQA1P01909 Y_RNA.474-201ENST00000384341 102 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 SNORD116-13-201ENST00000384408 92 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 MIR625-201ENST00000385047 85 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 MRPS18CP6-201ENST00000423587 223 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 AL162725.1-201ENST00000435405 301 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 snoU13.25-201ENST00000458945 104 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 SNORD124-201ENST00000459577 104 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 SNORA25.10-201ENST00000515926 124 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 RNU6-470P-201ENST00000515954 104 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 SNORD79.1-201ENST00000516069 84 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 RNU6-966P-201ENST00000516479 104 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 AL358944.1-201ENST00000528537 144 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.71□□□□□ -2.3
HLA-DQA1P01909 MIR5690-201ENST00000583739 73 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 AL359821.1-201ENST00000605519 182 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 AL096861.1-201ENST00000610899 123 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 AC011476.5-201ENST00000615594 130 ntBASIC0.71□□□□□ -2.3
HLA-DQA1P01909 SNORD68-201ENST00000363214 84 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 RNU4-38P-201ENST00000364472 129 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 RNU6-708P-201ENST00000384217 107 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 MIR19B1-201ENST00000384829 87 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 MIR891A-201ENST00000401237 79 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 AL031003.1-201ENST00000404229 172 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 Y_RNA.621-201ENST00000411065 96 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 RNU6-1199P-201ENST00000411249 104 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.7□□□□□ -2.3
HLA-DQA1P01909 SUMO1P2-201ENST00000452524 304 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 AC114811.1-201ENST00000507207 168 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 TRMT112P2-201ENST00000512910 132 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.7□□□□□ -2.3
HLA-DQA1P01909 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.7□□□□□ -2.3
HLA-DQA1P01909 AC240442.1-201ENST00000616055 283 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 AL008636.1-201ENST00000625038 1018 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 AL391516.1-201ENST00000554380 2449 ntBASIC0.7□□□□□ -2.3
HLA-DQA1P01909 RNU6-626P-201ENST00000363354 107 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 RNU6-833P-201ENST00000363486 107 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 SNORD114-2-201ENST00000363953 78 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 RNU6-20P-201ENST00000384106 107 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 RNU6-163P-201ENST00000384396 106 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 RNU2-54P-201ENST00000410299 190 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 Y_RNA.605-201ENST00000410577 105 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 AC096644.2-201ENST00000429278 159 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 LINC01399-202ENST00000458450 244 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.69□□□□□ -2.3
HLA-DQA1P01909 MIR3192-201ENST00000584920 77 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 AC120024.3-201ENST00000603167 156 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 AL357312.1-201ENST00000603879 298 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 PRELID3BP2-201ENST00000605362 201 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 AL020996.3-201ENST00000606617 222 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 AL591926.4-201ENST00000616895 298 ntBASIC0.69□□□□□ -2.3
HLA-DQA1P01909 AC063976.4-201ENST00000421971 163 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 RPL39P39-201ENST00000455840 151 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.68□□□□□ -2.3
HLA-DQA1P01909 UBL5P1-201ENST00000507979 193 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 RNU6-1053P-201ENST00000515930 101 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 RNU6-559P-201ENST00000516151 98 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 RNU6-436P-201ENST00000516171 114 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 RNU6-1012P-201ENST00000516606 109 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 AC144568.1-201ENST00000520139 137 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 MIR4498-201ENST00000577599 66 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 AC006380.1-201ENST00000603598 186 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 AC004832.4-201ENST00000608952 331 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.68□□□□□ -2.3
HLA-DQA1P01909 AC138305.3-201ENST00000624988 240 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 MTND4LP32-201ENST00000636111 270 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
HLA-DQA1P01909 AC008163.1-202ENST00000636004 2889 ntBASIC0.68□□□□□ -2.3
HLA-DQA1P01909 Y_RNA.314-201ENST00000365114 102 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 RNU6-53P-201ENST00000365367 106 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 RNU6-969P-201ENST00000383900 105 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 Y_RNA.446-201ENST00000384178 104 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 RNY3P4-201ENST00000384428 101 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 SNORA80D-201ENST00000384488 135 ntBASIC0.67□□□□□ -2.3
HLA-DQA1P01909 Y_RNA.505-201ENST00000384489 102 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms