Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AL161431.1-201ENST00000618966 4205 ntBASIC2.84□□□□□ -1.96
TRIM13O60858 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.84□□□□□ -1.96
TRIM13O60858 AL589743.1-201ENST00000551932 2712 ntBASIC2.84□□□□□ -1.96
TRIM13O60858 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM13O60858 AC092435.3-201ENST00000565538 3654 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 SNORA63.5-201ENST00000363548 123 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 Y_RNA.366-201ENST00000365540 102 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 SNORA1-201ENST00000384107 130 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 RNU6-820P-201ENST00000384273 107 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 RNU6-975P-201ENST00000384296 105 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 RNU6-1152P-201ENST00000384576 107 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 MIR183-201ENST00000384958 110 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 AC063976.3-201ENST00000426849 329 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 AC018634.1-201ENST00000437554 401 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM13O60858 RPL21P129-201ENST00000491732 478 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 SEM1P1-201ENST00000506694 209 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 ATP5EP1-201ENST00000510257 156 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 RNU6-109P-201ENST00000516364 107 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 RNU6-184P-201ENST00000516514 107 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 AC107016.2-201ENST00000547968 190 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM13O60858 MIR3129-201ENST00000581095 76 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 MIR4753-201ENST00000585119 83 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 AC008739.2-201ENST00000597006 317 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 AL137067.1-201ENST00000615933 120 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 AC025521.1-201ENST00000621624 286 ntBASIC2.83□□□□□ -1.96
TRIM13O60858 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM13O60858 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM13O60858 SNORA71.1-201ENST00000364523 117 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 SNORA62.3-201ENST00000365110 153 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 RNU6-1292P-201ENST00000383856 107 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 MIR590-201ENST00000385008 97 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 MIR450A2-201ENST00000385022 100 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 SNORA26.7-201ENST00000391288 122 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 RNU6-57P-201ENST00000411348 103 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 AC007064.1-201ENST00000412238 351 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 RPS4XP11-201ENST00000446897 772 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM13O60858 SNORA9.3-201ENST00000516383 129 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM13O60858 MIR7112-201ENST00000616126 65 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 Y_RNA.818-201ENST00000618813 71 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 MIR7975-201ENST00000619350 68 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM13O60858 AC009487.2-201ENST00000420969 6821 ntBASIC2.82□□□□□ -1.96
TRIM13O60858 Y_RNA.362-201ENST00000365518 110 ntBASIC2.81□□□□□ -1.96
TRIM13O60858 MIR134-201ENST00000385258 73 ntBASIC2.81□□□□□ -1.96
TRIM13O60858 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM13O60858 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM13O60858 MICF-203ENST00000432679 129 ntBASIC2.81□□□□□ -1.96
TRIM13O60858 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.81□□□□□ -1.96
TRIM13O60858 RNU7-14P-201ENST00000459331 62 ntBASIC2.81□□□□□ -1.96
TRIM13O60858 RPS29P12-201ENST00000460178 152 ntBASIC2.81□□□□□ -1.96
TRIM13O60858 RN7SL297P-201ENST00000483161 293 ntBASIC2.81□□□□□ -1.96
TRIM13O60858 AC008885.1-201ENST00000514930 301 ntBASIC2.81□□□□□ -1.96
TRIM13O60858 MIR3605-201ENST00000583214 100 ntBASIC2.81□□□□□ -1.96
TRIM13O60858 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.81□□□□□ -1.96
TRIM13O60858 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM13O60858 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
TRIM13O60858 Y_RNA.219-201ENST00000364232 113 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 SNORD78.1-201ENST00000390866 65 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 RPL30P4-201ENST00000429309 333 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 MTATP8P2-201ENST00000435212 202 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 AC109327.2-201ENST00000448339 378 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 AC016717.1-201ENST00000448918 286 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 RNU6-504P-201ENST00000516568 104 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 RNU6-1149P-201ENST00000516810 97 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 AC034105.4-201ENST00000568304 277 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 MIR5004-201ENST00000579078 107 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM13O60858 AC134878.1-201ENST00000619901 243 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 AC015726.2-201ENST00000620112 122 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 MIR7157-201ENST00000635801 60 ntBASIC2.8□□□□□ -1.96
TRIM13O60858 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM13O60858 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM13O60858 AC009487.4-201ENST00000624969 3585 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM13O60858 Y_RNA.78-201ENST00000362970 110 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 Y_RNA.198-201ENST00000364013 98 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 MIR449B-201ENST00000384995 97 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 SNORA19.1-201ENST00000410656 129 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 RNA5SP120-201ENST00000410900 112 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 AC092017.2-201ENST00000427600 362 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 RN7SL807P-201ENST00000470923 297 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 SCARNA15-202ENST00000516881 127 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM13O60858 MIR5009-201ENST00000578736 100 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM13O60858 AC096577.2-201ENST00000611455 153 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 MALAT1.1-201ENST00000618249 95 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 U6.73-201ENST00000619194 103 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 AC034229.5-201ENST00000624258 185 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM13O60858 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.79□□□□□ -1.96
TRIM13O60858 RNU1-22P-201ENST00000363334 158 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 RNU6-851P-201ENST00000384565 107 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 AL117342.1-201ENST00000404861 406 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 285.2 ms