Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
GFRA3O60609 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
GFRA3O60609 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
GFRA3O60609 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
GFRA3O60609 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
GFRA3O60609 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA3O60609 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
GFRA3O60609 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA3O60609 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA3O60609 AC008264.2-201ENST00000610193 3731 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 SNORA1B-201ENST00000362535 133 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 SNORA22.1-201ENST00000362701 134 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 RNA5SP133-201ENST00000363368 119 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 Y_RNA.236-201ENST00000364427 111 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 RNU6-630P-201ENST00000391258 106 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 RNU6-1186P-201ENST00000410429 97 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.72□□□□□ -1.81
GFRA3O60609 RN7SL504P-201ENST00000494496 287 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 AC078918.1-201ENST00000498515 228 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 PHBP14-201ENST00000512887 367 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 RNU7-99P-201ENST00000516271 62 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 MIR6079-201ENST00000635807 62 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
GFRA3O60609 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
GFRA3O60609 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.72□□□□□ -1.81
GFRA3O60609 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.72□□□□□ -1.81
GFRA3O60609 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GFRA3O60609 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
GFRA3O60609 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GFRA3O60609 RNU6-669P-201ENST00000365575 107 ntBASIC3.71□□□□□ -1.82
GFRA3O60609 RNU6-480P-201ENST00000384332 107 ntBASIC3.71□□□□□ -1.82
GFRA3O60609 SNORA2B-201ENST00000384583 137 ntBASIC3.71□□□□□ -1.82
GFRA3O60609 MIR154-201ENST00000385243 84 ntBASIC3.71□□□□□ -1.82
GFRA3O60609 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
GFRA3O60609 SNORA48.8-201ENST00000391324 134 ntBASIC3.71□□□□□ -1.82
GFRA3O60609 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.71□□□□□ -1.82
GFRA3O60609 AC107083.1-201ENST00000439643 279 ntBASIC3.71□□□□□ -1.82
GFRA3O60609 RNU7-34P-201ENST00000459394 64 ntBASIC3.71□□□□□ -1.82
GFRA3O60609 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.71□□□□□ -1.82
GFRA3O60609 MIR7851-201ENST00000610611 160 ntBASIC3.71□□□□□ -1.82
GFRA3O60609 AC012676.2-201ENST00000619258 186 ntBASIC3.71□□□□□ -1.82
GFRA3O60609 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
GFRA3O60609 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GFRA3O60609 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
GFRA3O60609 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.71□□□□□ -1.82
GFRA3O60609 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
GFRA3O60609 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.7□□□□□ -1.82
GFRA3O60609 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.7□□□□□ -1.82
GFRA3O60609 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
GFRA3O60609 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA3O60609 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA3O60609 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
GFRA3O60609 RNU6-1084P-201ENST00000362498 107 ntBASIC3.7□□□□□ -1.82
GFRA3O60609 SNORD9-201ENST00000362566 104 ntBASIC3.7□□□□□ -1.82
GFRA3O60609 AC110620.1-201ENST00000416042 228 ntBASIC3.7□□□□□ -1.82
GFRA3O60609 AL109933.2-201ENST00000452651 260 ntBASIC3.7□□□□□ -1.82
GFRA3O60609 AL049830.1-201ENST00000468034 425 ntBASIC3.7□□□□□ -1.82
GFRA3O60609 RPPH1-2P-201ENST00000516688 293 ntBASIC3.7□□□□□ -1.82
GFRA3O60609 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.7□□□□□ -1.82
GFRA3O60609 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA3O60609 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA3O60609 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA3O60609 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
GFRA3O60609 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA3O60609 FAM35BP-202ENST00000497389 3337 ntBASIC3.7□□□□□ -1.82
GFRA3O60609 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA3O60609 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA3O60609 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.69□□□□□ -1.82
GFRA3O60609 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.69□□□□□ -1.82
GFRA3O60609 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
GFRA3O60609 RNA5SP502-201ENST00000362694 119 ntBASIC3.69□□□□□ -1.82
GFRA3O60609 RNU6-829P-201ENST00000363700 112 ntBASIC3.69□□□□□ -1.82
GFRA3O60609 Y_RNA.241-201ENST00000364470 117 ntBASIC3.69□□□□□ -1.82
GFRA3O60609 U8.5-201ENST00000364528 136 ntBASIC3.69□□□□□ -1.82
GFRA3O60609 snoU2-30.1-201ENST00000365012 70 ntBASIC3.69□□□□□ -1.82
GFRA3O60609 Y_RNA.336-201ENST00000365307 109 ntBASIC3.69□□□□□ -1.82
GFRA3O60609 SNORD45.4-201ENST00000516629 73 ntBASIC3.69□□□□□ -1.82
GFRA3O60609 RNU6-303P-201ENST00000517091 106 ntBASIC3.69□□□□□ -1.82
GFRA3O60609 AC100770.1-201ENST00000532310 322 ntBASIC3.69□□□□□ -1.82
GFRA3O60609 AC079598.5-201ENST00000547460 117 ntBASIC3.69□□□□□ -1.82
GFRA3O60609 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.69□□□□□ -1.82
GFRA3O60609 MIR5680-201ENST00000577577 84 ntBASIC3.69□□□□□ -1.82
GFRA3O60609 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.69□□□□□ -1.82
GFRA3O60609 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
GFRA3O60609 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
GFRA3O60609 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
GFRA3O60609 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GFRA3O60609 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
GFRA3O60609 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GFRA3O60609 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
GFRA3O60609 AL136964.1-201ENST00000622038 2990 ntBASIC3.68□□□□□ -1.82
GFRA3O60609 SNORD68-201ENST00000363214 84 ntBASIC3.68□□□□□ -1.82
GFRA3O60609 SNORA25.4-201ENST00000363666 124 ntBASIC3.68□□□□□ -1.82
GFRA3O60609 MIR147B-201ENST00000390185 80 ntBASIC3.68□□□□□ -1.82
GFRA3O60609 RPS15AP28-201ENST00000435088 386 ntBASIC3.68□□□□□ -1.82
GFRA3O60609 RNU7-85P-201ENST00000458851 63 ntBASIC3.68□□□□□ -1.82
GFRA3O60609 MIR4458-201ENST00000578872 75 ntBASIC3.68□□□□□ -1.82
GFRA3O60609 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.68□□□□□ -1.82
GFRA3O60609 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GFRA3O60609 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms