Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 Y_RNA.551-201ENST00000384661 102 ntBASIC1.4□□□□□ -2.19
SNX3O60493 MIR562-201ENST00000384894 95 ntBASIC1.4□□□□□ -2.19
SNX3O60493 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
SNX3O60493 RPL23AP36-201ENST00000413895 458 ntBASIC1.4□□□□□ -2.19
SNX3O60493 AL390729.2-201ENST00000416137 156 ntBASIC1.4□□□□□ -2.19
SNX3O60493 OOSP1P1-201ENST00000423265 274 ntBASIC1.4□□□□□ -2.19
SNX3O60493 AL162725.1-201ENST00000435405 301 ntBASIC1.4□□□□□ -2.19
SNX3O60493 PGBD4P5-201ENST00000445958 426 ntBASIC1.4□□□□□ -2.19
SNX3O60493 AC010655.3-201ENST00000478818 450 ntBASIC1.4□□□□□ -2.19
SNX3O60493 OR9P1P-201ENST00000496431 281 ntBASIC1.4□□□□□ -2.19
SNX3O60493 AC079140.2-201ENST00000506193 142 ntBASIC1.4□□□□□ -2.19
SNX3O60493 Y_RNA.711-201ENST00000516993 102 ntBASIC1.4□□□□□ -2.19
SNX3O60493 Y_RNA.713-201ENST00000517013 96 ntBASIC1.4□□□□□ -2.19
SNX3O60493 AP002004.2-201ENST00000531656 154 ntBASIC1.4□□□□□ -2.19
SNX3O60493 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.4□□□□□ -2.19
SNX3O60493 SNORA28-201ENST00000606769 126 ntBASIC1.4□□□□□ -2.19
SNX3O60493 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.4□□□□□ -2.19
SNX3O60493 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.4□□□□□ -2.19
SNX3O60493 AC040896.1-201ENST00000613819 479 ntBASIC1.4□□□□□ -2.19
SNX3O60493 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
SNX3O60493 Y_RNA.216-201ENST00000364205 93 ntBASIC1.39□□□□□ -2.19
SNX3O60493 RNA5SP259-201ENST00000365541 109 ntBASIC1.39□□□□□ -2.19
SNX3O60493 RNU6-823P-201ENST00000391042 103 ntBASIC1.39□□□□□ -2.19
SNX3O60493 CALM2P4-201ENST00000430810 426 ntBASIC1.39□□□□□ -2.19
SNX3O60493 AC027119.1-201ENST00000440877 241 ntBASIC1.39□□□□□ -2.19
SNX3O60493 RPS4XP11-201ENST00000446897 772 ntBASIC1.39□□□□□ -2.19
SNX3O60493 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.39□□□□□ -2.19
SNX3O60493 RNU6-397P-201ENST00000516226 104 ntBASIC1.39□□□□□ -2.19
SNX3O60493 RNU6-1046P-201ENST00000516538 107 ntBASIC1.39□□□□□ -2.19
SNX3O60493 AC022616.4-201ENST00000522985 181 ntBASIC1.39□□□□□ -2.19
SNX3O60493 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.39□□□□□ -2.19
SNX3O60493 AC020661.2-201ENST00000560114 134 ntBASIC1.39□□□□□ -2.19
SNX3O60493 AC136932.1-201ENST00000574771 208 ntBASIC1.39□□□□□ -2.19
SNX3O60493 MIR3171-201ENST00000584270 74 ntBASIC1.39□□□□□ -2.19
SNX3O60493 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.39□□□□□ -2.19
SNX3O60493 AC073349.3-201ENST00000617616 186 ntBASIC1.39□□□□□ -2.19
SNX3O60493 AL513423.1-201ENST00000621695 132 ntBASIC1.39□□□□□ -2.19
SNX3O60493 MIR517C-201ENST00000385103 95 ntBASIC1.38□□□□□ -2.19
SNX3O60493 U8.13-201ENST00000390842 128 ntBASIC1.38□□□□□ -2.19
SNX3O60493 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
SNX3O60493 RPS27P16-201ENST00000425758 201 ntBASIC1.38□□□□□ -2.19
SNX3O60493 AC015922.2-201ENST00000435593 184 ntBASIC1.38□□□□□ -2.19
SNX3O60493 RPL23AP94-201ENST00000512518 302 ntBASIC1.38□□□□□ -2.19
SNX3O60493 RNA5SP445-201ENST00000515889 115 ntBASIC1.38□□□□□ -2.19
SNX3O60493 Y_RNA.701-201ENST00000516812 110 ntBASIC1.38□□□□□ -2.19
SNX3O60493 Y_RNA.715-201ENST00000517082 110 ntBASIC1.38□□□□□ -2.19
SNX3O60493 DEFB117-201ENST00000602356 141 ntBASIC1.38□□□□□ -2.19
SNX3O60493 AL365434.2-201ENST00000607979 234 ntBASIC1.38□□□□□ -2.19
SNX3O60493 AC004832.4-201ENST00000608952 331 ntBASIC1.38□□□□□ -2.19
SNX3O60493 MIR7843-201ENST00000622274 79 ntBASIC1.38□□□□□ -2.19
SNX3O60493 SNORD3E-202ENST00000627253 216 ntBASIC1.38□□□□□ -2.19
SNX3O60493 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SNX3O60493 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
SNX3O60493 Y_RNA.389-201ENST00000383924 113 ntBASIC1.37□□□□□ -2.19
SNX3O60493 RNU6-1080P-201ENST00000383982 107 ntBASIC1.37□□□□□ -2.19
SNX3O60493 RNU6-21P-201ENST00000384710 107 ntBASIC1.37□□□□□ -2.19
SNX3O60493 U8.16-201ENST00000391279 133 ntBASIC1.37□□□□□ -2.19
SNX3O60493 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
SNX3O60493 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.37□□□□□ -2.19
SNX3O60493 AC245517.4-201ENST00000448601 281 ntBASIC1.37□□□□□ -2.19
SNX3O60493 AL049830.1-201ENST00000468034 425 ntBASIC1.37□□□□□ -2.19
SNX3O60493 RNA5SP168-201ENST00000516642 112 ntBASIC1.37□□□□□ -2.19
SNX3O60493 RNU7-28P-201ENST00000516759 62 ntBASIC1.37□□□□□ -2.19
SNX3O60493 RNU6-902P-201ENST00000517212 91 ntBASIC1.37□□□□□ -2.19
SNX3O60493 AL358944.1-201ENST00000528537 144 ntBASIC1.37□□□□□ -2.19
SNX3O60493 AL160236.1-201ENST00000556317 195 ntBASIC1.37□□□□□ -2.19
SNX3O60493 MIR3937-201ENST00000580135 106 ntBASIC1.37□□□□□ -2.19
SNX3O60493 RAC1P9-201ENST00000604990 392 ntBASIC1.37□□□□□ -2.19
SNX3O60493 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.37□□□□□ -2.19
SNX3O60493 WWP1P1-201ENST00000466609 2769 ntBASIC1.37□□□□□ -2.19
SNX3O60493 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SNX3O60493 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
SNX3O60493 U8.1-201ENST00000362843 134 ntBASIC1.36□□□□□ -2.19
SNX3O60493 RNU4-41P-201ENST00000364426 143 ntBASIC1.36□□□□□ -2.19
SNX3O60493 Y_RNA.286-201ENST00000364813 102 ntBASIC1.36□□□□□ -2.19
SNX3O60493 SNORA63.7-201ENST00000365579 123 ntBASIC1.36□□□□□ -2.19
SNX3O60493 RNU6-424P-201ENST00000384367 105 ntBASIC1.36□□□□□ -2.19
SNX3O60493 MIR660-201ENST00000385235 97 ntBASIC1.36□□□□□ -2.19
SNX3O60493 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.36□□□□□ -2.19
SNX3O60493 RNA5SP482-201ENST00000391269 118 ntBASIC1.36□□□□□ -2.19
SNX3O60493 RNU6-101P-201ENST00000410323 104 ntBASIC1.36□□□□□ -2.19
SNX3O60493 RNU6-855P-201ENST00000410395 104 ntBASIC1.36□□□□□ -2.19
SNX3O60493 Z98949.2-201ENST00000440996 144 ntBASIC1.36□□□□□ -2.19
SNX3O60493 RPS20P10-201ENST00000451209 253 ntBASIC1.36□□□□□ -2.19
SNX3O60493 MIR4778-201ENST00000577635 80 ntBASIC1.36□□□□□ -2.19
SNX3O60493 MIR3145-201ENST00000580727 82 ntBASIC1.36□□□□□ -2.19
SNX3O60493 PRR13P7-201ENST00000605538 430 ntBASIC1.36□□□□□ -2.19
SNX3O60493 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.36□□□□□ -2.19
SNX3O60493 SNORD33-201ENST00000362761 85 ntBASIC1.35□□□□□ -2.19
SNX3O60493 AL627390.1-201ENST00000396055 340 ntBASIC1.35□□□□□ -2.19
SNX3O60493 AL590004.1-201ENST00000405321 300 ntBASIC1.35□□□□□ -2.19
SNX3O60493 MIR1252-201ENST00000408861 65 ntBASIC1.35□□□□□ -2.19
SNX3O60493 RNU6-710P-201ENST00000410424 105 ntBASIC1.35□□□□□ -2.19
SNX3O60493 Y_RNA.621-201ENST00000411065 96 ntBASIC1.35□□□□□ -2.19
SNX3O60493 RPS29P29-201ENST00000456396 171 ntBASIC1.35□□□□□ -2.19
SNX3O60493 RNU6-1153P-201ENST00000516760 105 ntBASIC1.35□□□□□ -2.19
SNX3O60493 RNU6-897P-201ENST00000517135 105 ntBASIC1.35□□□□□ -2.19
SNX3O60493 Y_RNA.721-201ENST00000517207 102 ntBASIC1.35□□□□□ -2.19
SNX3O60493 AC011604.1-201ENST00000545978 196 ntBASIC1.35□□□□□ -2.19
SNX3O60493 MIR4300-201ENST00000581016 96 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms