Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 SNORA48.11-201ENST00000517015 89 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 AC025647.1-201ENST00000517879 253 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 AL356280.1-201ENST00000603614 379 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 MIR1248-201ENST00000629190 106 ntBASIC3.27□□□□□ -1.89
GRIN3BO60391 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
GRIN3BO60391 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
GRIN3BO60391 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
GRIN3BO60391 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
GRIN3BO60391 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
GRIN3BO60391 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.26□□□□□ -1.89
GRIN3BO60391 RNU6-438P-201ENST00000365561 103 ntBASIC3.26□□□□□ -1.89
GRIN3BO60391 RNU6-1323P-201ENST00000384025 107 ntBASIC3.26□□□□□ -1.89
GRIN3BO60391 SNORD14D-201ENST00000384390 87 ntBASIC3.26□□□□□ -1.89
GRIN3BO60391 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.26□□□□□ -1.89
GRIN3BO60391 AL158823.1-201ENST00000418441 478 ntBASIC3.26□□□□□ -1.89
GRIN3BO60391 AC016717.1-201ENST00000448918 286 ntBASIC3.26□□□□□ -1.89
GRIN3BO60391 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.26□□□□□ -1.89
GRIN3BO60391 RNU7-115P-201ENST00000516433 55 ntBASIC3.26□□□□□ -1.89
GRIN3BO60391 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.26□□□□□ -1.89
GRIN3BO60391 MIR4498-201ENST00000577599 66 ntBASIC3.26□□□□□ -1.89
GRIN3BO60391 AP003357.1-201ENST00000604497 148 ntBASIC3.26□□□□□ -1.89
GRIN3BO60391 MIR548AY-201ENST00000617669 107 ntBASIC3.26□□□□□ -1.89
GRIN3BO60391 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.26□□□□□ -1.89
GRIN3BO60391 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
GRIN3BO60391 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GRIN3BO60391 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GRIN3BO60391 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
GRIN3BO60391 Y_RNA.140-201ENST00000363474 103 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 RNU4-10P-201ENST00000364383 140 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 Y_RNA.355-201ENST00000365462 98 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 SNORA40.5-201ENST00000391061 128 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 MIR513C-201ENST00000401352 84 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 MIR1302-4-201ENST00000408701 150 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 RNU2-32P-201ENST00000411193 191 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 AC245517.4-201ENST00000448601 281 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 HMGN2P18-201ENST00000450680 270 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 RN7SL636P-201ENST00000497504 294 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.25□□□□□ -1.89
GRIN3BO60391 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.25□□□□□ -1.89
GRIN3BO60391 MIR4724-201ENST00000579485 89 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 ZNF861P-201ENST00000588126 639 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 AC090115.4-201ENST00000609970 188 ntBASIC3.25□□□□□ -1.89
GRIN3BO60391 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.25□□□□□ -1.89
GRIN3BO60391 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.25□□□□□ -1.89
GRIN3BO60391 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
GRIN3BO60391 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
GRIN3BO60391 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
GRIN3BO60391 Y_RNA.24-201ENST00000362508 103 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 RNU6-969P-201ENST00000383900 105 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 MIR518C-201ENST00000384822 101 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.24□□□□□ -1.89
GRIN3BO60391 HSPE1P21-201ENST00000438283 308 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 RN7SL633P-201ENST00000488974 297 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 AC023141.11-201ENST00000508864 202 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 RNA5SP20-201ENST00000515976 84 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 RN7SKP43-201ENST00000516173 320 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 RNA5SP320-201ENST00000516263 124 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 RNA5SP76-201ENST00000516277 87 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 RNU7-116P-201ENST00000516940 62 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 RNA5SP490-201ENST00000517141 136 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 MIR4781-201ENST00000585250 76 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 AL591926.4-201ENST00000616895 298 ntBASIC3.24□□□□□ -1.89
GRIN3BO60391 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
GRIN3BO60391 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GRIN3BO60391 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
GRIN3BO60391 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
GRIN3BO60391 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GRIN3BO60391 Y_RNA.369-201ENST00000365568 117 ntBASIC3.23□□□□□ -1.89
GRIN3BO60391 SNORD116-13-201ENST00000384408 92 ntBASIC3.23□□□□□ -1.89
GRIN3BO60391 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.23□□□□□ -1.89
GRIN3BO60391 RPS12P2-201ENST00000439728 269 ntBASIC3.23□□□□□ -1.89
GRIN3BO60391 AL357134.1-201ENST00000445848 426 ntBASIC3.23□□□□□ -1.89
GRIN3BO60391 RN7SL499P-201ENST00000481141 276 ntBASIC3.23□□□□□ -1.89
GRIN3BO60391 SCARNA8-201ENST00000515924 131 ntBASIC3.23□□□□□ -1.89
GRIN3BO60391 Y_RNA.694-201ENST00000516677 117 ntBASIC3.23□□□□□ -1.89
GRIN3BO60391 RNU6-965P-201ENST00000516721 96 ntBASIC3.23□□□□□ -1.89
GRIN3BO60391 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.23□□□□□ -1.89
GRIN3BO60391 AC005972.2-201ENST00000604690 348 ntBASIC3.23□□□□□ -1.89
GRIN3BO60391 AC011603.4-201ENST00000611325 277 ntBASIC3.23□□□□□ -1.89
GRIN3BO60391 AC068647.2-201ENST00000637380 353 ntBASIC3.23□□□□□ -1.89
GRIN3BO60391 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.23□□□□□ -1.89
GRIN3BO60391 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.23□□□□□ -1.89
GRIN3BO60391 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GRIN3BO60391 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
GRIN3BO60391 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GRIN3BO60391 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GRIN3BO60391 MIR367-201ENST00000362299 68 ntBASIC3.22□□□□□ -1.89
GRIN3BO60391 Y_RNA.251-201ENST00000364551 99 ntBASIC3.22□□□□□ -1.89
GRIN3BO60391 RNU6-1240P-201ENST00000365155 104 ntBASIC3.22□□□□□ -1.89
GRIN3BO60391 RNU6-418P-201ENST00000384035 107 ntBASIC3.22□□□□□ -1.89
GRIN3BO60391 Y_RNA.572-201ENST00000384757 98 ntBASIC3.22□□□□□ -1.89
GRIN3BO60391 SNORA36B-201ENST00000410438 131 ntBASIC3.22□□□□□ -1.89
GRIN3BO60391 AC016909.1-201ENST00000415916 166 ntBASIC3.22□□□□□ -1.89
GRIN3BO60391 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.22□□□□□ -1.89
GRIN3BO60391 MTCO1P44-201ENST00000441935 243 ntBASIC3.22□□□□□ -1.89
GRIN3BO60391 AC010531.2-201ENST00000465012 153 ntBASIC3.22□□□□□ -1.89
GRIN3BO60391 AC117454.1-201ENST00000491120 168 ntBASIC3.22□□□□□ -1.89
GRIN3BO60391 AC107027.2-201ENST00000512197 115 ntBASIC3.22□□□□□ -1.89
GRIN3BO60391 AC109810.1-201ENST00000534066 224 ntBASIC3.22□□□□□ -1.89
GRIN3BO60391 MIR3914-2-201ENST00000637339 95 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms