Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MIR21-201ENST00000362134 72 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 RNU1-72P-201ENST00000362976 153 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 VTRNA1-1-201ENST00000363120 99 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 RNY1P11-201ENST00000363759 113 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 RNU6-1080P-201ENST00000383982 107 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 RNU6-44P-201ENST00000384045 107 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 AL512604.1-201ENST00000404812 257 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 AL035461.1-201ENST00000421490 332 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 RPS27P22-201ENST00000478056 241 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 RPL36AP21-201ENST00000490372 323 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 RAC1P5-201ENST00000512182 576 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 RNU4-57P-201ENST00000515980 135 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 RNU6-948P-201ENST00000516374 107 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 AC090142.3-201ENST00000519012 385 ntBASIC2.95□□□□□ -1.94
SRGAP3O43295 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.95□□□□□ -1.94
SRGAP3O43295 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.95□□□□□ -1.94
SRGAP3O43295 MAPK10-266ENST00000641066 6555 ntBASIC2.94□□□□□ -1.94
SRGAP3O43295 RNU6-915P-201ENST00000364943 103 ntBASIC2.94□□□□□ -1.94
SRGAP3O43295 RNU6-136P-201ENST00000384663 107 ntBASIC2.94□□□□□ -1.94
SRGAP3O43295 MIR1278-201ENST00000408753 81 ntBASIC2.94□□□□□ -1.94
SRGAP3O43295 RNA5SP511-201ENST00000410487 115 ntBASIC2.94□□□□□ -1.94
SRGAP3O43295 RPL30P4-201ENST00000429309 333 ntBASIC2.94□□□□□ -1.94
SRGAP3O43295 EEF1B2P7-201ENST00000451177 676 ntBASIC2.94□□□□□ -1.94
SRGAP3O43295 AC025647.1-201ENST00000517879 253 ntBASIC2.94□□□□□ -1.94
SRGAP3O43295 MIR4513-201ENST00000581077 86 ntBASIC2.94□□□□□ -1.94
SRGAP3O43295 AL049861.1-201ENST00000603130 150 ntBASIC2.94□□□□□ -1.94
SRGAP3O43295 AC120024.3-201ENST00000603167 156 ntBASIC2.94□□□□□ -1.94
SRGAP3O43295 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.94□□□□□ -1.94
SRGAP3O43295 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SRGAP3O43295 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SRGAP3O43295 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SRGAP3O43295 AL391516.1-201ENST00000554380 2449 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SRGAP3O43295 MIR6073-201ENST00000352083 89 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 RNU6-743P-201ENST00000364151 106 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 RNU6-1082P-201ENST00000364574 107 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 RNU6-1325P-201ENST00000364905 105 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 RNU6-1235P-201ENST00000384559 107 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SRGAP3O43295 AC008134.1-201ENST00000420943 193 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 AC010154.1-201ENST00000425857 269 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 SNRPGP8-201ENST00000454064 226 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 AC016925.1-201ENST00000458303 298 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 RNU6-498P-201ENST00000459468 107 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.93□□□□□ -1.94
SRGAP3O43295 RNU6-919P-201ENST00000516731 104 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 AC015720.1-201ENST00000565251 277 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 MIR3199-1-201ENST00000582434 88 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 U7.2-201ENST00000607576 63 ntBASIC2.93□□□□□ -1.94
SRGAP3O43295 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SRGAP3O43295 CENPCP1-201ENST00000533085 2578 ntBASIC2.92□□□□□ -1.94
SRGAP3O43295 RNU6-1336P-201ENST00000383886 109 ntBASIC2.92□□□□□ -1.94
SRGAP3O43295 RNU1-101P-201ENST00000391171 127 ntBASIC2.92□□□□□ -1.94
SRGAP3O43295 RNA5SP496-201ENST00000391240 109 ntBASIC2.92□□□□□ -1.94
SRGAP3O43295 RN7SKP101-201ENST00000411376 320 ntBASIC2.92□□□□□ -1.94
SRGAP3O43295 AC090515.1-201ENST00000465295 476 ntBASIC2.92□□□□□ -1.94
SRGAP3O43295 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.92□□□□□ -1.94
SRGAP3O43295 SNORD59.2-201ENST00000516873 68 ntBASIC2.92□□□□□ -1.94
SRGAP3O43295 RNA5SP490-201ENST00000517141 136 ntBASIC2.92□□□□□ -1.94
SRGAP3O43295 SCARNA11.3-201ENST00000517276 130 ntBASIC2.92□□□□□ -1.94
SRGAP3O43295 MIR378D2-201ENST00000580636 98 ntBASIC2.92□□□□□ -1.94
SRGAP3O43295 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.92□□□□□ -1.94
SRGAP3O43295 AP001340.1-201ENST00000624405 217 ntBASIC2.92□□□□□ -1.94
SRGAP3O43295 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SRGAP3O43295 RNU6-674P-201ENST00000363831 107 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 RNA5SP139-201ENST00000364340 117 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 SNORD114-30-201ENST00000364448 72 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 RNU6-1240P-201ENST00000365155 104 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 Y_RNA.432-201ENST00000384087 111 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SRGAP3O43295 HMGN2P35-201ENST00000412164 270 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 AC016909.1-201ENST00000415916 166 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.91□□□□□ -1.94
SRGAP3O43295 RNU7-107P-201ENST00000459121 61 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 AC010531.2-201ENST00000465012 153 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 RNA5SP24-201ENST00000516478 95 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 SNORA31.15-201ENST00000516771 132 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.91□□□□□ -1.94
SRGAP3O43295 AC006435.5-201ENST00000624486 112 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 MIR1248-201ENST00000629190 106 ntBASIC2.91□□□□□ -1.94
SRGAP3O43295 Z82209.1-201ENST00000422141 2135 ntBASIC2.9□□□□□ -1.94
SRGAP3O43295 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SRGAP3O43295 Y_RNA.251-201ENST00000364551 99 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 RNU1-51P-201ENST00000365345 176 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.9□□□□□ -1.95
SRGAP3O43295 CD24P4-201ENST00000382840 243 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 Y_RNA.525-201ENST00000384570 113 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 Y_RNA.584-201ENST00000391090 114 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 RNA5SP181-201ENST00000410246 98 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 CKS1BP2-201ENST00000497342 240 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 RNU6-659P-201ENST00000516454 104 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 RNA5SP281-201ENST00000516504 135 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 RNU6-197P-201ENST00000516680 100 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 AC018630.3-201ENST00000542637 96 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.9□□□□□ -1.95
SRGAP3O43295 AC105245.1-201ENST00000581934 244 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 AL929325.1-201ENST00000603096 117 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 MIR7515-201ENST00000637837 67 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 ZNF271P-202ENST00000465539 1970 ntBASIC2.9□□□□□ -1.95
SRGAP3O43295 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms