Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.75□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 Y_RNA.85-201ENST00000363014 111 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 Y_RNA.634-201ENST00000364811 113 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 MIR488-201ENST00000365739 83 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RNY1P7-201ENST00000384743 110 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 SNORA11.2-201ENST00000408318 127 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 MIR1185-2-201ENST00000408687 86 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 Z96811.1-201ENST00000445880 108 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AL021397.1-201ENST00000451806 248 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AC003982.1-202ENST00000469928 248 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AC096725.1-201ENST00000514266 313 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RNU7-116P-201ENST00000516940 62 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 MIR3605-201ENST00000583214 100 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AL021707.8-201ENST00000609428 183 ntBASIC2.74□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 SNORA63.5-201ENST00000363548 123 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RNU6-674P-201ENST00000363831 107 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RNU4-13P-201ENST00000364019 141 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RNU6-440P-201ENST00000390882 105 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 SNORA26.7-201ENST00000391288 122 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AL139095.1-201ENST00000404326 391 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RNU2-32P-201ENST00000411193 191 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AC108938.1-201ENST00000451204 136 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AC010531.2-201ENST00000465012 153 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RNU6-970P-201ENST00000516312 107 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RPL23AP91-201ENST00000569211 455 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AC105245.1-201ENST00000581934 244 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 HSPE1P7-201ENST00000604681 321 ntBASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 SNORA27.1-201ENST00000362604 124 ntBASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 MIR887-201ENST00000401258 79 ntBASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RNA5SP511-201ENST00000410487 115 ntBASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RPS26P55-201ENST00000471178 356 ntBASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RPL23AP94-201ENST00000512518 302 ntBASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RNU6-109P-201ENST00000516364 107 ntBASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 RNU6-184P-201ENST00000516514 107 ntBASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AL160236.1-201ENST00000556317 195 ntBASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AL929325.1-201ENST00000603096 117 ntBASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AC002064.3-201ENST00000623448 346 ntBASIC2.72□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.97
C1QTNF3-AMACRE9PGA6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU2-49P-201ENST00000410666 184 ntBASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RN7SKP123-201ENST00000410732 291 ntBASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU6-592P-201ENST00000411333 103 ntBASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 CALM2P4-201ENST00000430810 426 ntBASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RPS3P1-201ENST00000456781 192 ntBASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 HMGN2P9-201ENST00000476875 229 ntBASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RPL39P34-201ENST00000477141 156 ntBASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNA5SP153-201ENST00000516498 76 ntBASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC007536.1-201ENST00000533382 349 ntBASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC091152.3-201ENST00000604227 325 ntBASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 uc_338.4-201ENST00000616635 176 ntBASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU6-1014P-201ENST00000383940 103 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MIR586-201ENST00000385035 97 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MIR147B-201ENST00000390185 80 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNA5SP252-201ENST00000391131 119 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MIR891A-201ENST00000401237 79 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNA5SP127-201ENST00000411051 133 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNA5SP492-201ENST00000411330 114 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AF228730.3-201ENST00000436691 102 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MTATP6P21-201ENST00000440681 189 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC023449.1-201ENST00000454464 154 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 SNORD65B-201ENST00000459126 73 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 snoU13.28-201ENST00000459235 104 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU7-57P-201ENST00000459540 60 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNA5SP20-201ENST00000515976 84 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNA5SP281-201ENST00000516504 135 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU5F-4P-201ENST00000516581 114 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU6-1098P-201ENST00000516772 96 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 Pinc.1-201ENST00000616452 154 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AL035470.1-201ENST00000622571 220 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.7□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU6-1010P-201ENST00000362757 107 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU6-655P-201ENST00000362858 107 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 RNU6-271P-201ENST00000363858 105 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 SNORD56.5-201ENST00000364281 72 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 MIR570-201ENST00000384917 97 ntBASIC2.69□□□□□ -1.98
C1QTNF3-AMACRE9PGA6 AC023141.4-201ENST00000412031 328 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 237.3 ms