Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 Y_RNA.101-201ENST00000363154 102 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 RNU6-379P-201ENST00000363813 104 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 RNU6-271P-201ENST00000363858 105 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 Y_RNA.287-201ENST00000364853 94 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 RNU6-290P-201ENST00000365212 101 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 Y_RNA.331-201ENST00000365267 102 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 Y_RNA.476-201ENST00000384347 108 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 Y_RNA.477-201ENST00000384352 108 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SRRM4A7MD48 AC016909.1-201ENST00000415916 166 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.48□□□□□ -2.17
SRRM4A7MD48 AC003989.2-201ENST00000440224 169 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 RPL39P38-201ENST00000467018 153 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 RPS29P21-201ENST00000496272 170 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.48□□□□□ -2.17
SRRM4A7MD48 HMGB3P17-201ENST00000504195 649 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 MTND1P19-201ENST00000511780 315 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 RNU6-966P-201ENST00000516479 104 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 SCARNA24.2-201ENST00000516968 130 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 MIR3128-201ENST00000581957 66 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 AC012433.1-201ENST00000588916 398 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 AC012493.3-201ENST00000604494 112 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 SNORD113-5-201ENST00000607261 78 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 AC090425.1-201ENST00000610007 140 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 AC127459.3-201ENST00000624328 466 ntBASIC1.48□□□□□ -2.17
SRRM4A7MD48 SNORD33-201ENST00000362761 85 ntBASIC1.47□□□□□ -2.17
SRRM4A7MD48 U8.2-201ENST00000363156 134 ntBASIC1.47□□□□□ -2.17
SRRM4A7MD48 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.47□□□□□ -2.17
SRRM4A7MD48 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.47□□□□□ -2.17
SRRM4A7MD48 JTBP1-201ENST00000441314 247 ntBASIC1.47□□□□□ -2.17
SRRM4A7MD48 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.47□□□□□ -2.17
SRRM4A7MD48 snoU13.9-201ENST00000458927 103 ntBASIC1.47□□□□□ -2.17
SRRM4A7MD48 snoU13.27-201ENST00000459278 104 ntBASIC1.47□□□□□ -2.17
SRRM4A7MD48 RPL23AP63-201ENST00000498752 471 ntBASIC1.47□□□□□ -2.17
SRRM4A7MD48 SEPT14P8-201ENST00000508026 178 ntBASIC1.47□□□□□ -2.17
SRRM4A7MD48 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SRRM4A7MD48 RNU7-99P-201ENST00000516271 62 ntBASIC1.47□□□□□ -2.17
SRRM4A7MD48 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.47□□□□□ -2.17
SRRM4A7MD48 MIR4419B-201ENST00000577260 68 ntBASIC1.47□□□□□ -2.17
SRRM4A7MD48 AC004467.1-201ENST00000615678 330 ntBASIC1.47□□□□□ -2.17
SRRM4A7MD48 U6.73-201ENST00000619194 103 ntBASIC1.47□□□□□ -2.17
SRRM4A7MD48 MIR3674-201ENST00000636576 68 ntBASIC1.47□□□□□ -2.17
SRRM4A7MD48 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.47□□□□□ -2.17
SRRM4A7MD48 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.47□□□□□ -2.17
SRRM4A7MD48 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SRRM4A7MD48 MIR335-201ENST00000362173 94 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 SNORD114-7-201ENST00000362520 77 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 RNU6-454P-201ENST00000364292 107 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 RNU6-1318P-201ENST00000365389 103 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 Y_RNA.446-201ENST00000384178 104 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 Y_RNA.489-201ENST00000384410 101 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 AL390729.2-201ENST00000416137 156 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 AL121890.1-201ENST00000435457 205 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 MTND4LP30-201ENST00000454092 297 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 RPS26P45-201ENST00000471748 340 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 RPS29P11-201ENST00000496507 171 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 AC107393.1-201ENST00000512403 346 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 SERF1AP1-201ENST00000514575 187 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 Y_RNA.673-201ENST00000516306 88 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 RNU6-155P-201ENST00000516347 100 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 RNU6-388P-201ENST00000517012 105 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 RNU6-389P-201ENST00000517048 105 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 AC022441.3-201ENST00000605737 136 ntBASIC1.46□□□□□ -2.18
SRRM4A7MD48 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
SRRM4A7MD48 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.45□□□□□ -2.18
SRRM4A7MD48 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SRRM4A7MD48 Y_RNA.569-201ENST00000384749 103 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 AC019129.1-201ENST00000403786 261 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 MIR548H3-201ENST00000408771 118 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 RPL23AP36-201ENST00000413895 458 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 AL445685.2-201ENST00000422551 342 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 POLR2KP2-201ENST00000438155 177 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 MRPS10P1-201ENST00000448483 130 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 AC005042.3-201ENST00000453230 174 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 SNORD65B-201ENST00000459126 73 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 RNU6-1023P-201ENST00000516137 106 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 RPL21P9-201ENST00000556149 474 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 MIR4709-201ENST00000577272 72 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 AC005357.1-201ENST00000588399 301 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 AL162424.1-201ENST00000602325 221 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 AC078938.1-201ENST00000620993 318 ntBASIC1.45□□□□□ -2.18
SRRM4A7MD48 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
SRRM4A7MD48 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SRRM4A7MD48 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SRRM4A7MD48 Y_RNA.54-201ENST00000362766 105 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 SNORD27-201ENST00000363981 72 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 SNORA20.1-201ENST00000364790 130 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 SNORD48-201ENST00000364953 64 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 Y_RNA.383-201ENST00000383855 97 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 Y_RNA.416-201ENST00000384014 113 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 MIR9-3-201ENST00000385084 90 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 SNORA53-201ENST00000391141 249 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 RNA5SP467-201ENST00000391274 118 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 AL603910.2-201ENST00000407268 136 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 MIR1261-201ENST00000408659 82 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 RNU2-54P-201ENST00000410299 190 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 RNU6-1199P-201ENST00000411249 104 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.44□□□□□ -2.18
SRRM4A7MD48 AC108059.2-201ENST00000434626 151 ntBASIC1.44□□□□□ -2.18
SRRM4A7MD48 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms