Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 SNORA1B-201ENST00000362535 133 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.527-201ENST00000384573 102 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 RNU6-21P-201ENST00000384710 107 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 RNU6-823P-201ENST00000391042 103 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 RNU6-101P-201ENST00000410323 104 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 RN7SKP51-201ENST00000410781 304 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 RNU5A-5P-201ENST00000411054 116 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 RN7SKP101-201ENST00000411376 320 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 FTH1P12-201ENST00000432137 551 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 AL603825.1-201ENST00000438481 80 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 AC005042.3-201ENST00000453230 174 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 AC099513.1-201ENST00000490423 301 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 AC093852.1-201ENST00000503587 266 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 RNU6-475P-201ENST00000516073 104 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 SNORA70.12-201ENST00000516084 153 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 SUMO2P16-201ENST00000519475 264 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 AC020661.2-201ENST00000560114 134 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 DEFB117-201ENST00000602356 141 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 AL356055.1-201ENST00000602528 446 ntBASIC1.38□□□□□ -2.19
NKX6-3A6NJ46 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 RNA5SP190-201ENST00000365222 118 ntBASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 RNU6-117P-201ENST00000365415 107 ntBASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 RNA5SP259-201ENST00000365541 109 ntBASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 RNU6-950P-201ENST00000384651 107 ntBASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 SNORA12.1-201ENST00000390873 148 ntBASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.602-201ENST00000410535 92 ntBASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 SUMO1P2-201ENST00000452524 304 ntBASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 AC010655.3-201ENST00000478818 450 ntBASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 RAC1P9-201ENST00000604990 392 ntBASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 BX248123.2-201ENST00000606318 124 ntBASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NKX6-3A6NJ46 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.286-201ENST00000364813 102 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 RNU6-338P-201ENST00000383888 105 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 RNU6-1080P-201ENST00000383982 107 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.551-201ENST00000384661 102 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 AL034345.1-201ENST00000407768 123 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 RNU6-855P-201ENST00000410395 104 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 AC004965.1-201ENST00000413033 213 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 RPL23AP36-201ENST00000413895 458 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.715-201ENST00000517082 110 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 AC015720.1-201ENST00000565251 277 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 AC136932.1-201ENST00000574771 208 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 MIR4423-201ENST00000580922 80 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 AC091178.2-201ENST00000584401 117 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 AC106754.2-201ENST00000623006 233 ntBASIC1.36□□□□□ -2.19
NKX6-3A6NJ46 SNORD81.1-201ENST00000363064 77 ntBASIC1.35□□□□□ -2.19
NKX6-3A6NJ46 SNORD48-201ENST00000364953 64 ntBASIC1.35□□□□□ -2.19
NKX6-3A6NJ46 MIR513A1-201ENST00000385138 129 ntBASIC1.35□□□□□ -2.19
NKX6-3A6NJ46 SNORD13-201ENST00000459299 104 ntBASIC1.35□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.638-201ENST00000459374 113 ntBASIC1.35□□□□□ -2.19
NKX6-3A6NJ46 RNU6-341P-201ENST00000516973 96 ntBASIC1.35□□□□□ -2.19
NKX6-3A6NJ46 RNU6-897P-201ENST00000517135 105 ntBASIC1.35□□□□□ -2.19
NKX6-3A6NJ46 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.35□□□□□ -2.19
NKX6-3A6NJ46 MIR4778-201ENST00000577635 80 ntBASIC1.35□□□□□ -2.19
NKX6-3A6NJ46 SNORD53B-201ENST00000577887 78 ntBASIC1.35□□□□□ -2.19
NKX6-3A6NJ46 AP001485.1-201ENST00000604799 199 ntBASIC1.35□□□□□ -2.19
NKX6-3A6NJ46 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.35□□□□□ -2.19
NKX6-3A6NJ46 SNORD1A-201ENST00000364968 72 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.361-201ENST00000365515 120 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.462-201ENST00000384268 102 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 MIR194-1-201ENST00000384892 85 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 SNORA17.3-201ENST00000391159 129 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 AL590004.1-201ENST00000405321 300 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 RNU2-61P-201ENST00000411069 191 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 AL161935.2-201ENST00000414627 60 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 CALM2P4-201ENST00000430810 426 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 RPS4XP11-201ENST00000446897 772 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 AL049830.1-201ENST00000468034 425 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.713-201ENST00000517013 96 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 AP000942.3-201ENST00000603702 160 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 SNORD3E-202ENST00000627253 216 ntBASIC1.34□□□□□ -2.19
NKX6-3A6NJ46 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
NKX6-3A6NJ46 AL161722.3-201ENST00000605789 2983 ntBASIC1.33□□□□□ -2.2
NKX6-3A6NJ46 SNORD113-8-201ENST00000363497 74 ntBASIC1.33□□□□□ -2.2
NKX6-3A6NJ46 Y_RNA.202-201ENST00000364083 110 ntBASIC1.33□□□□□ -2.2
NKX6-3A6NJ46 RNU6-102P-201ENST00000384485 104 ntBASIC1.33□□□□□ -2.2
NKX6-3A6NJ46 MIR520G-201ENST00000385064 90 ntBASIC1.33□□□□□ -2.2
NKX6-3A6NJ46 SNORA67.5-201ENST00000391036 107 ntBASIC1.33□□□□□ -2.2
NKX6-3A6NJ46 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
NKX6-3A6NJ46 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.33□□□□□ -2.2
NKX6-3A6NJ46 AL162725.1-201ENST00000435405 301 ntBASIC1.33□□□□□ -2.2
NKX6-3A6NJ46 PGBD4P5-201ENST00000445958 426 ntBASIC1.33□□□□□ -2.2
NKX6-3A6NJ46 RNA5SP458-201ENST00000516188 119 ntBASIC1.33□□□□□ -2.2
NKX6-3A6NJ46 AC022616.4-201ENST00000522985 181 ntBASIC1.33□□□□□ -2.2
NKX6-3A6NJ46 AP002004.2-201ENST00000531656 154 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms