Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRAV20A0A0B4J274 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 AL035425.3-201ENST00000564206 4996 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 RNU6-774P-201ENST00000363238 107 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 Y_RNA.170-201ENST00000363746 110 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 Y_RNA.253-201ENST00000364562 112 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 Y_RNA.398-201ENST00000383952 99 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 AC245047.3-201ENST00000429428 127 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 AL606517.2-201ENST00000442855 241 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 SNORD11-201ENST00000459124 84 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 AL049830.1-201ENST00000468034 425 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 RN7SL297P-201ENST00000483161 293 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 AC008885.1-201ENST00000514930 301 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 SCARNA20.6-201ENST00000517251 106 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 AC004486.1-201ENST00000546846 233 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 UBL5P2-201ENST00000583788 219 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 uc_338.4-201ENST00000616635 176 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 AC012640.5-201ENST00000623897 319 ntBASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
TRAV20A0A0B4J274 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
TRAV20A0A0B4J274 RNU6-746P-201ENST00000384112 109 ntBASIC2.58□□□□□ -2
TRAV20A0A0B4J274 RNA5SP109-201ENST00000391010 116 ntBASIC2.58□□□□□ -2
TRAV20A0A0B4J274 AC022018.1-201ENST00000430685 241 ntBASIC2.58□□□□□ -2
TRAV20A0A0B4J274 SNRPGP10-201ENST00000432323 225 ntBASIC2.58□□□□□ -2
TRAV20A0A0B4J274 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.58□□□□□ -2
TRAV20A0A0B4J274 AC107027.2-201ENST00000512197 115 ntBASIC2.58□□□□□ -2
TRAV20A0A0B4J274 MIR4513-201ENST00000581077 86 ntBASIC2.58□□□□□ -2
TRAV20A0A0B4J274 MIR7106-201ENST00000612419 65 ntBASIC2.58□□□□□ -2
TRAV20A0A0B4J274 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRAV20A0A0B4J274 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.58□□□□□ -2
TRAV20A0A0B4J274 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
TRAV20A0A0B4J274 SNORD45.3-201ENST00000363836 72 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 SNORD116-18-201ENST00000383961 92 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 SNORA44-201ENST00000384584 132 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 RNU6-239P-201ENST00000390990 99 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 AC007064.1-201ENST00000412238 351 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 AC245047.4-201ENST00000433189 144 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.57□□□□□ -2
TRAV20A0A0B4J274 AC069257.2-201ENST00000441819 155 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 RPS27P1-201ENST00000450552 247 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.57□□□□□ -2
TRAV20A0A0B4J274 AP004217.1-201ENST00000480579 346 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 RNVU1-2-201ENST00000516326 135 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 MTND5P41-201ENST00000517498 206 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 CTSLP2-204ENST00000629029 392 ntBASIC2.57□□□□□ -2
TRAV20A0A0B4J274 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.57□□□□□ -2
TRAV20A0A0B4J274 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
TRAV20A0A0B4J274 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
TRAV20A0A0B4J274 MIR126-201ENST00000362291 85 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 RNU6-643P-201ENST00000384018 107 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 Y_RNA.500-201ENST00000384466 111 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 Y_RNA.506-201ENST00000384494 102 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 SNORA48.1-201ENST00000390879 135 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 Y_RNA.580-201ENST00000391004 95 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 AC006461.1-201ENST00000412637 326 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 SNRPGP8-201ENST00000454064 226 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.56□□□□□ -2
TRAV20A0A0B4J274 RNU7-193P-201ENST00000516723 65 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 Y_RNA.703-201ENST00000516846 111 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 SNORA31.25-201ENST00000517242 134 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 AC107016.2-201ENST00000547968 190 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 MIR3133-201ENST00000583157 78 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 AL591926.4-201ENST00000616895 298 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 AL137790.1-201ENST00000634283 177 ntBASIC2.56□□□□□ -2
TRAV20A0A0B4J274 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRAV20A0A0B4J274 SNORA80A-201ENST00000363922 136 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 RNU6-1130P-201ENST00000365434 107 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 RNU6-449P-201ENST00000383914 107 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 Y_RNA.510-201ENST00000384511 114 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 SNORA79-201ENST00000408376 140 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 RNU4-43P-201ENST00000410628 137 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 RNA5SP501-201ENST00000410990 112 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 RNU2-55P-201ENST00000411146 174 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.55□□□□□ -2
TRAV20A0A0B4J274 MLLT10P1-201ENST00000418346 262 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.55□□□□□ -2
TRAV20A0A0B4J274 RNU7-200P-201ENST00000516105 62 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 SNORD77.4-201ENST00000516158 81 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 MIR4529-201ENST00000578110 78 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 AC006023.1-201ENST00000603944 259 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 MTND1P7-201ENST00000632801 297 ntBASIC2.55□□□□□ -2
TRAV20A0A0B4J274 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.54□□□□□ -2
TRAV20A0A0B4J274 MIR22-201ENST00000362190 85 ntBASIC2.54□□□□□ -2
TRAV20A0A0B4J274 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
TRAV20A0A0B4J274 Y_RNA.432-201ENST00000384087 111 ntBASIC2.54□□□□□ -2
TRAV20A0A0B4J274 RNU6-125P-201ENST00000384505 107 ntBASIC2.54□□□□□ -2
TRAV20A0A0B4J274 SNORA12.1-201ENST00000390873 148 ntBASIC2.54□□□□□ -2
TRAV20A0A0B4J274 SUMO1P4-201ENST00000429430 302 ntBASIC2.54□□□□□ -2
TRAV20A0A0B4J274 RNU6-1299P-201ENST00000516316 100 ntBASIC2.54□□□□□ -2
TRAV20A0A0B4J274 RNU7-149P-201ENST00000516739 59 ntBASIC2.54□□□□□ -2
TRAV20A0A0B4J274 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms