Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SNORD11B-201ENST00000607707 90 ntBASIC-1.22□□□□□ -2.6
TRAV30A0A087WSZ9 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 SNORD56B-201ENST00000384713 71 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 RNU6-376P-201ENST00000384731 106 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 MIR9-2-201ENST00000384838 87 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 MIR588-201ENST00000384900 83 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 MIR516B1-201ENST00000385211 90 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 MIR1284-201ENST00000408337 120 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 RNU6-329P-201ENST00000459618 107 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 RNA5SP470-201ENST00000516463 106 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 MIR378F-201ENST00000578143 78 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 POLR3GP1-201ENST00000594073 261 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 uc_338.19-201ENST00000616808 99 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 AC126544.2-201ENST00000625174 749 ntBASIC-1.23□□□□□ -2.61
TRAV30A0A087WSZ9 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 SNORA20B-201ENST00000384220 132 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 RNU6-35P-201ENST00000384530 107 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 RNU6-455P-201ENST00000384681 107 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 MIR204-201ENST00000385200 110 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 AC010655.3-201ENST00000478818 450 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 RNU6-685P-201ENST00000517088 95 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 AC123904.2-201ENST00000548059 300 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 MIR4324-201ENST00000584846 72 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 BNIP3P40-201ENST00000596017 556 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 RNU6-86P-201ENST00000606534 107 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 AC092574.1-201ENST00000609771 420 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 ZNF299P-201ENST00000406845 1804 ntBASIC-1.24□□□□□ -2.61
TRAV30A0A087WSZ9 MIR522-201ENST00000385071 87 ntBASIC-1.25□□□□□ -2.61
TRAV30A0A087WSZ9 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.25□□□□□ -2.61
TRAV30A0A087WSZ9 RNU4-83P-201ENST00000410863 133 ntBASIC-1.25□□□□□ -2.61
TRAV30A0A087WSZ9 SSR1P2-201ENST00000415208 787 ntBASIC-1.25□□□□□ -2.61
TRAV30A0A087WSZ9 AC018865.2-201ENST00000423631 129 ntBASIC-1.25□□□□□ -2.61
TRAV30A0A087WSZ9 AL445193.1-201ENST00000441183 141 ntBASIC-1.25□□□□□ -2.61
TRAV30A0A087WSZ9 SNORA25.13-201ENST00000516395 103 ntBASIC-1.25□□□□□ -2.61
TRAV30A0A087WSZ9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.25□□□□□ -2.61
TRAV30A0A087WSZ9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.25□□□□□ -2.61
TRAV30A0A087WSZ9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 AC073343.1-201ENST00000328239 651 ntBASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 SNORD50B-201ENST00000364995 70 ntBASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 RNU6-61P-201ENST00000365528 109 ntBASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 U8.17-201ENST00000391292 132 ntBASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 MTND4P18-201ENST00000447010 465 ntBASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 snoU13.2-201ENST00000459201 104 ntBASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 RNU6-274P-201ENST00000459566 107 ntBASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 SNORD38.3-201ENST00000516599 73 ntBASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 MTND4P33-201ENST00000556706 766 ntBASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 ZNF92P2-201ENST00000600543 1059 ntBASIC-1.26□□□□□ -2.61
TRAV30A0A087WSZ9 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 MIR450B-201ENST00000401182 78 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 RNU6-855P-201ENST00000410395 104 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 RNA5SP494-201ENST00000410653 129 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 MTCO2P6-201ENST00000463134 685 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 AF186996.7-201ENST00000492781 209 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 RNA5SP20-201ENST00000515976 84 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 RN7SKP19-201ENST00000516016 252 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 RNU7-51P-201ENST00000516560 62 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 AL133255.1-201ENST00000606374 441 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 AC091965.4-201ENST00000607691 587 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 MIR6738-201ENST00000619620 64 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 AC013437.2-201ENST00000639587 677 ntBASIC-1.27□□□□□ -2.61
TRAV30A0A087WSZ9 RNA5SP245-201ENST00000364239 121 ntBASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 SNORD115-44-201ENST00000365391 82 ntBASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 RNU6-926P-201ENST00000384075 107 ntBASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 RNU6-39P-201ENST00000384344 107 ntBASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 AL137792.2-201ENST00000443484 235 ntBASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 MTCO3P38-201ENST00000468910 766 ntBASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 AC131281.1-201ENST00000522984 164 ntBASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 MTND5P34-201ENST00000568888 325 ntBASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 AL355297.3-201ENST00000604082 446 ntBASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 MIR6082-201ENST00000613604 109 ntBASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 MIR6851-201ENST00000617060 67 ntBASIC-1.28□□□□□ -2.61
TRAV30A0A087WSZ9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.29□□□□□ -2.62
TRAV30A0A087WSZ9 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.29□□□□□ -2.62
TRAV30A0A087WSZ9 RNU6-24P-201ENST00000384440 107 ntBASIC-1.29□□□□□ -2.62
TRAV30A0A087WSZ9 MT-TF-201ENST00000387314 71 ntBASIC-1.29□□□□□ -2.62
TRAV30A0A087WSZ9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.29□□□□□ -2.62
TRAV30A0A087WSZ9 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.29□□□□□ -2.62
TRAV30A0A087WSZ9 UQCRBP2-201ENST00000447827 297 ntBASIC-1.29□□□□□ -2.62
TRAV30A0A087WSZ9 SCARNA18B-201ENST00000458806 135 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms