Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A3BPQ9Y5P4 RPS27P1-201ENST00000450552 247 ntBASIC2.39□□□□□ -2.03
COL4A3BPQ9Y5P4 RPL23AP42-201ENST00000471152 471 ntBASIC2.39□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-341P-201ENST00000516973 96 ntBASIC2.39□□□□□ -2.03
COL4A3BPQ9Y5P4 AP003733.2-201ENST00000529409 171 ntBASIC2.39□□□□□ -2.03
COL4A3BPQ9Y5P4 AC008737.2-201ENST00000599446 118 ntBASIC2.39□□□□□ -2.03
COL4A3BPQ9Y5P4 AC022217.4-201ENST00000604389 163 ntBASIC2.39□□□□□ -2.03
COL4A3BPQ9Y5P4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.39□□□□□ -2.03
COL4A3BPQ9Y5P4 Y_RNA.286-201ENST00000364813 102 ntBASIC2.38□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-290P-201ENST00000365212 101 ntBASIC2.38□□□□□ -2.03
COL4A3BPQ9Y5P4 SNORA53-201ENST00000391141 249 ntBASIC2.38□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-121P-201ENST00000410525 99 ntBASIC2.38□□□□□ -2.03
COL4A3BPQ9Y5P4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.38□□□□□ -2.03
COL4A3BPQ9Y5P4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
COL4A3BPQ9Y5P4 Y_RNA.105-201ENST00000363182 111 ntBASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 SNORA67.3-201ENST00000384366 140 ntBASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 AL023284.1-201ENST00000403956 276 ntBASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 AL162725.1-201ENST00000435405 301 ntBASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 HSPE1P25-201ENST00000455484 251 ntBASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU7-34P-201ENST00000459394 64 ntBASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 AC091021.1-201ENST00000468051 388 ntBASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 MIR5002-201ENST00000584713 97 ntBASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 AL162424.1-201ENST00000602325 221 ntBASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 AL360085.1-201ENST00000604713 532 ntBASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 MIR8054-201ENST00000620877 86 ntBASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 AL359851.1-201ENST00000569460 4997 ntBASIC2.37□□□□□ -2.03
COL4A3BPQ9Y5P4 Y_RNA.162-201ENST00000363683 102 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 Y_RNA.456-201ENST00000384232 111 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 Y_RNA.569-201ENST00000384749 103 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-1109P-201ENST00000391187 107 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 snoU13.15-201ENST00000459407 104 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 snoU13.26-201ENST00000459452 105 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 HMGN1P10-201ENST00000474557 553 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-635P-201ENST00000516651 102 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-63P-201ENST00000516690 95 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU2-56P-201ENST00000516826 190 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 AL358944.1-201ENST00000528537 144 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 AP002004.2-201ENST00000531656 154 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 SNORA28-201ENST00000606769 126 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 MIR8074-201ENST00000615081 81 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 MIR219B-201ENST00000637023 88 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 U6.104-201ENST00000637979 90 ntBASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL4A3BPQ9Y5P4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 Y_RNA.136-201ENST00000363444 102 ntBASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 Y_RNA.341-201ENST00000365341 102 ntBASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 Y_RNA.368-201ENST00000365547 113 ntBASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 Y_RNA.459-201ENST00000384251 102 ntBASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-102P-201ENST00000384485 104 ntBASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 AL606517.2-201ENST00000442855 241 ntBASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-327P-201ENST00000516270 127 ntBASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 SCARNA15.1-201ENST00000516384 125 ntBASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-1096P-201ENST00000517089 102 ntBASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 AC015720.1-201ENST00000565251 277 ntBASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 AC091178.2-201ENST00000584401 117 ntBASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 AC103810.8-201ENST00000607347 118 ntBASIC2.35□□□□□ -2.03
COL4A3BPQ9Y5P4 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 Y_RNA.64-201ENST00000362845 102 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-514P-201ENST00000384208 107 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-440P-201ENST00000390882 105 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 AL034345.1-201ENST00000407768 123 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 MIR1267-201ENST00000408723 78 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 RNA5SP511-201ENST00000410487 115 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 DYNLT3P2-201ENST00000442517 295 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 RPS20P10-201ENST00000451209 253 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU7-28P-201ENST00000516759 62 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 MIR3198-2-201ENST00000577868 80 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 MIR3145-201ENST00000580727 82 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 AC136443.5-201ENST00000603741 370 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 AC005972.2-201ENST00000604690 348 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 AL353621.2-201ENST00000605340 133 ntBASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.34□□□□□ -2.03
COL4A3BPQ9Y5P4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
COL4A3BPQ9Y5P4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.04
COL4A3BPQ9Y5P4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 SNORD114-1-201ENST00000362705 72 ntBASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 Y_RNA.176-201ENST00000363815 109 ntBASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 SNORA4.2-201ENST00000365313 147 ntBASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 SNORD116-13-201ENST00000384408 92 ntBASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU6-136P-201ENST00000384663 107 ntBASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 MIR30A-201ENST00000385092 71 ntBASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 RNA5SP489-201ENST00000410986 109 ntBASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 RPL21P38-201ENST00000418090 167 ntBASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 AC004832.4-201ENST00000608952 331 ntBASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
COL4A3BPQ9Y5P4 AC092881.1-201ENST00000638218 2733 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 snoU2_19.2-201ENST00000363024 80 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU4-80P-201ENST00000363200 141 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU6-806P-201ENST00000365147 105 ntBASIC2.32□□□□□ -2.04
COL4A3BPQ9Y5P4 RNU6-326P-201ENST00000365480 107 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms