Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MIR4438-201ENST00000585271 93 ntBASIC1.32□□□□□ -2.2
RPH3AQ9Y2J0 AL929325.1-201ENST00000603096 117 ntBASIC1.32□□□□□ -2.2
RPH3AQ9Y2J0 AL365434.2-201ENST00000607979 234 ntBASIC1.32□□□□□ -2.2
RPH3AQ9Y2J0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.32□□□□□ -2.2
RPH3AQ9Y2J0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
RPH3AQ9Y2J0 RNU6-874P-201ENST00000362390 105 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 RNA5SP361-201ENST00000362686 118 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 Y_RNA.356-201ENST00000365475 113 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 RNU6-1031P-201ENST00000384773 107 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 MIR598-201ENST00000384868 97 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 Y_RNA.592-201ENST00000410274 109 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 PGBD4P5-201ENST00000445958 426 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 RPS27P1-201ENST00000450552 247 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 AC092991.1-201ENST00000477176 376 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 AC091951.2-201ENST00000500762 203 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 AL512310.8-201ENST00000550183 120 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 CYP3A52P-201ENST00000563326 91 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 AC084781.2-201ENST00000615568 161 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 MIR3674-201ENST00000636576 68 ntBASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RPH3AQ9Y2J0 U8.1-201ENST00000362843 134 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 RNU1-93P-201ENST00000364704 169 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 Y_RNA.428-201ENST00000384078 102 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 RNY4P36-201ENST00000391116 96 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 FCF1P4-201ENST00000448326 183 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 MRPS10P1-201ENST00000448483 130 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 ELOCP24-201ENST00000456370 334 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 U8.22-201ENST00000459141 133 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 AC010469.2-201ENST00000496412 480 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 SNORA40.9-201ENST00000515895 93 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 RNU6-875P-201ENST00000516488 106 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 AC027419.1-201ENST00000522976 328 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 AC019288.1-201ENST00000557918 224 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 AC008269.2-201ENST00000561915 1105 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 AL162424.1-201ENST00000602325 221 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 AC006380.1-201ENST00000603598 186 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 AL132765.2-201ENST00000610812 351 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 AC021506.2-201ENST00000612354 169 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 MTND4LP32-201ENST00000636111 270 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 U6.108-201ENST00000637764 58 ntBASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
RPH3AQ9Y2J0 MIR410-201ENST00000362222 80 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 RNU6-1301P-201ENST00000362724 104 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 Y_RNA.146-201ENST00000363549 102 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 Y_RNA.205-201ENST00000364128 113 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 Y_RNA.263-201ENST00000364659 114 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 MT-TD-201ENST00000387419 68 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 ELOCP21-201ENST00000412558 336 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 MTCO3P19-201ENST00000415864 321 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 MTCO3P10-201ENST00000455912 772 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 RNU7-169P-201ENST00000459456 61 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 FGF7P4-201ENST00000509595 295 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 RNU6-911P-201ENST00000516523 104 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 AL355375.2-201ENST00000574825 175 ntBASIC1.29□□□□□ -2.2
RPH3AQ9Y2J0 RNU1-22P-201ENST00000363334 158 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 Y_RNA.187-201ENST00000363918 113 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 RNU6-407P-201ENST00000365280 104 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 RNU6-1040P-201ENST00000383974 107 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 MIR618-201ENST00000385287 98 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 MRPL42P3-201ENST00000401492 326 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 AL034345.1-201ENST00000407768 123 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 POLR2J4-204ENST00000418424 324 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 RAB28P5-201ENST00000427490 651 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 AC245047.3-201ENST00000429428 127 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 RNU6-1278P-201ENST00000516130 107 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 RNU6-277P-201ENST00000516272 106 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 Y_RNA.718-201ENST00000517110 102 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 RNU6-1223P-201ENST00000517124 104 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 RNU7-172P-201ENST00000517125 64 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 SNORD116.3-201ENST00000517176 78 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 AC023157.2-201ENST00000540596 141 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 MIR3664-201ENST00000579074 99 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 AC022217.4-201ENST00000604389 163 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 SNORA28-201ENST00000606769 126 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 AL138825.1-201ENST00000618587 192 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 U2.1-201ENST00000618978 145 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 MIR8054-201ENST00000620877 86 ntBASIC1.28□□□□□ -2.2
RPH3AQ9Y2J0 SNORA20B-201ENST00000384220 132 ntBASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 RNU6-318P-201ENST00000384283 103 ntBASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 SNORD78.2-201ENST00000391076 69 ntBASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 AC005002.2-201ENST00000438228 269 ntBASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 AL606517.2-201ENST00000442855 241 ntBASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 AC105758.1-201ENST00000506038 399 ntBASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 AL117351.2-201ENST00000513571 157 ntBASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 RNU6-408P-201ENST00000515910 100 ntBASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 RNA5SP20-201ENST00000515976 84 ntBASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 SNORA70.12-201ENST00000516084 153 ntBASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 SNORA31.10-201ENST00000516482 106 ntBASIC1.27□□□□□ -2.21
RPH3AQ9Y2J0 RN7SKP88-201ENST00000516847 250 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms