Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AP002884.2-201ENST00000471647 395 ntBASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 RNU6-998P-201ENST00000515894 101 ntBASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 MIR548AE2-201ENST00000583456 67 ntBASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 AC092881.1-201ENST00000638218 2733 ntBASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
TRIM35Q9UPQ4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TRIM35Q9UPQ4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 RNU6-1084P-201ENST00000362498 107 ntBASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 RNU6-478P-201ENST00000363904 110 ntBASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 RNU6-283P-201ENST00000364788 107 ntBASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 SNORA62.3-201ENST00000365110 153 ntBASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 SNORA27-201ENST00000384323 126 ntBASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 AL445685.2-201ENST00000422551 342 ntBASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 RNA5SP310-201ENST00000459084 116 ntBASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 RNU7-96P-201ENST00000459535 64 ntBASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 AL049830.1-201ENST00000468034 425 ntBASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 SNORA4.4-201ENST00000515921 135 ntBASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 RN7SKP83-201ENST00000516512 178 ntBASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 MIR4762-201ENST00000585261 75 ntBASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM35Q9UPQ4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM35Q9UPQ4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM35Q9UPQ4 RNU6-1244P-201ENST00000363614 108 ntBASIC4.7□□□□□ -1.66
TRIM35Q9UPQ4 SNORD38.1-201ENST00000363863 68 ntBASIC4.7□□□□□ -1.66
TRIM35Q9UPQ4 AL359837.1-201ENST00000381357 287 ntBASIC4.7□□□□□ -1.66
TRIM35Q9UPQ4 RNU6-411P-201ENST00000384451 107 ntBASIC4.7□□□□□ -1.66
TRIM35Q9UPQ4 RNA5SP171-201ENST00000391071 115 ntBASIC4.7□□□□□ -1.66
TRIM35Q9UPQ4 RNU7-23P-201ENST00000459465 62 ntBASIC4.7□□□□□ -1.66
TRIM35Q9UPQ4 RN7SKP18-201ENST00000516005 275 ntBASIC4.7□□□□□ -1.66
TRIM35Q9UPQ4 SEPT14P17-201ENST00000617978 177 ntBASIC4.7□□□□□ -1.66
TRIM35Q9UPQ4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM35Q9UPQ4 SNORD68-201ENST00000363214 84 ntBASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 Y_RNA.336-201ENST00000365307 109 ntBASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 AC093578.1-201ENST00000415219 368 ntBASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 UBL5P1-201ENST00000507979 193 ntBASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 RNA5SP33-201ENST00000516687 98 ntBASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 RNU6-579P-201ENST00000516879 102 ntBASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 RNU6-1258P-201ENST00000516911 111 ntBASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 RNU6-856P-201ENST00000516959 98 ntBASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 MIR3134-201ENST00000579433 74 ntBASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 USP8P1-201ENST00000494673 3183 ntBASIC4.69□□□□□ -1.66
TRIM35Q9UPQ4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM35Q9UPQ4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM35Q9UPQ4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM35Q9UPQ4 RNU4-32P-201ENST00000363404 141 ntBASIC4.68□□□□□ -1.66
TRIM35Q9UPQ4 RNU6-613P-201ENST00000410412 108 ntBASIC4.68□□□□□ -1.66
TRIM35Q9UPQ4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM35Q9UPQ4 HMGN2P18-201ENST00000450680 270 ntBASIC4.68□□□□□ -1.66
TRIM35Q9UPQ4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM35Q9UPQ4 AP002004.2-201ENST00000531656 154 ntBASIC4.68□□□□□ -1.66
TRIM35Q9UPQ4 ZNF861P-201ENST00000588126 639 ntBASIC4.68□□□□□ -1.66
TRIM35Q9UPQ4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 SNORA1B-201ENST00000362535 133 ntBASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 RNA5SP119-201ENST00000362715 117 ntBASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 Y_RNA.205-201ENST00000364128 113 ntBASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 U8.5-201ENST00000364528 136 ntBASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 Y_RNA.470-201ENST00000384307 117 ntBASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 CRYBB2P1-203ENST00000415709 538 ntBASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 SNORD105B-201ENST00000458770 79 ntBASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 U3.44-201ENST00000458938 192 ntBASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 AL133412.1-201ENST00000380194 2992 ntBASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
TRIM35Q9UPQ4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
TRIM35Q9UPQ4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
TRIM35Q9UPQ4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC4.66□□□□□ -1.66
TRIM35Q9UPQ4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM35Q9UPQ4 U4.6-201ENST00000621618 127 ntBASIC4.66□□□□□ -1.66
TRIM35Q9UPQ4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM35Q9UPQ4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
TRIM35Q9UPQ4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM35Q9UPQ4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM35Q9UPQ4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.65□□□□□ -1.66
TRIM35Q9UPQ4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.65□□□□□ -1.66
TRIM35Q9UPQ4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM35Q9UPQ4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 Y_RNA.386-201ENST00000383913 105 ntBASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 MIR200C-201ENST00000384980 68 ntBASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 MIR449B-201ENST00000384995 97 ntBASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 Z98742.2-201ENST00000431564 187 ntBASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 AC244505.4-201ENST00000434905 287 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms