Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU7-99P-201ENST00000516271 62 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 RNU7-30P-201ENST00000516835 62 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 AC027419.1-201ENST00000522976 328 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.4□□□□□ -2.34
CCDC88CQ9P219 SNORA28-201ENST00000606769 126 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 CASC19-280ENST00000642102 1351 ntBASIC0.4□□□□□ -2.34
CCDC88CQ9P219 RNU6-424P-201ENST00000384367 105 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 RNU6-1237P-201ENST00000384777 107 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 RNA5SP109-201ENST00000391010 116 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 MTCO3P40-201ENST00000392516 676 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 MTCYBP4-201ENST00000401524 249 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 Y_RNA.615-201ENST00000410769 117 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 AC098934.3-201ENST00000430450 190 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 snoU13.21-201ENST00000459368 105 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 RNU7-175P-201ENST00000515915 61 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 ACA59.1-201ENST00000515966 143 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 RNU6-864P-201ENST00000516256 108 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 SNORA62.5-201ENST00000516634 120 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.4□□□□□ -2.35
CCDC88CQ9P219 AC018659.1-201ENST00000551083 169 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 AL117336.2-201ENST00000602435 335 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
CCDC88CQ9P219 AL138726.1-201ENST00000614873 333 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 AC008873.1-201ENST00000625051 138 ntBASIC0.4□□□□□ -2.35
CCDC88CQ9P219 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CCDC88CQ9P219 RNU6-1084P-201ENST00000362498 107 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 SNORA1B-201ENST00000362535 133 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 RNU6-833P-201ENST00000363486 107 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 RNU6-407P-201ENST00000365280 104 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 VTRNA1-3-201ENST00000365645 89 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 RNU6-125P-201ENST00000384505 107 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 RNU6-110P-201ENST00000384508 104 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 MIR181A1-201ENST00000385026 110 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 U8.16-201ENST00000391279 133 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 PIGPP3-201ENST00000425307 415 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 OR9P1P-201ENST00000496431 281 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.39□□□□□ -2.35
CCDC88CQ9P219 AL360085.1-201ENST00000604713 532 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 AL357075.2-201ENST00000614906 189 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 AC015540.1-201ENST00000615828 501 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.39□□□□□ -2.35
CCDC88CQ9P219 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.39□□□□□ -2.35
CCDC88CQ9P219 RNU6-451P-201ENST00000362921 107 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 Y_RNA.85-201ENST00000363014 111 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 SNORD68-201ENST00000363214 84 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 Y_RNA.212-201ENST00000364177 102 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 RNU4-75P-201ENST00000364621 146 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 Y_RNA.265-201ENST00000364677 108 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 Y_RNA.318-201ENST00000365131 97 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 RNU4-12P-201ENST00000365233 139 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AC008134.1-201ENST00000420943 193 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 MRPS10P2-201ENST00000431226 381 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.38□□□□□ -2.35
CCDC88CQ9P219 Z83846.1-201ENST00000446798 265 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AC093303.1-201ENST00000514549 295 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 SNORA70.12-201ENST00000516084 153 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 RNU6-1281P-201ENST00000516223 105 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 RNU6-917P-201ENST00000516294 104 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 RNU6-107P-201ENST00000516643 102 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AP002004.2-201ENST00000531656 154 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AC124303.1-201ENST00000605703 360 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AF250324.2-201ENST00000608299 610 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 RNY4P14-201ENST00000363656 96 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 RNU6-595P-201ENST00000363944 107 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 RNU6-793P-201ENST00000384233 104 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 SNORA80D-201ENST00000384488 135 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 MIR605-201ENST00000385078 83 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.38□□□□□ -2.35
CCDC88CQ9P219 RNU7-12P-201ENST00000516030 62 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 Y_RNA.693-201ENST00000516641 110 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AC091144.1-201ENST00000519573 138 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AL358944.1-201ENST00000528537 144 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AC090617.3-201ENST00000573670 475 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 MIR4273-201ENST00000582824 84 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 AC004832.4-201ENST00000608952 331 ntBASIC0.38□□□□□ -2.35
CCDC88CQ9P219 SNORA27.1-201ENST00000362604 124 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 Y_RNA.330-201ENST00000365230 109 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 MIR526A1-201ENST00000384897 85 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 RNA5SP475-201ENST00000410568 110 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 RNU6-1148P-201ENST00000410992 104 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.37□□□□□ -2.35
CCDC88CQ9P219 USP9YP16-201ENST00000430287 407 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 MTND1P17-201ENST00000448961 204 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 AL157398.1-201ENST00000452981 186 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 USP9YP23-201ENST00000455085 407 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 U8.22-201ENST00000459141 133 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 SNORA40.12-201ENST00000516329 111 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 RNU6-835P-201ENST00000516974 104 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 AC093023.1-201ENST00000547375 507 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.37□□□□□ -2.35
CCDC88CQ9P219 AC025627.3-201ENST00000582078 182 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 AC080078.2-201ENST00000603766 501 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 AC027279.3-201ENST00000625055 122 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 ZNF299P-201ENST00000406845 1804 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 Y_RNA.135-201ENST00000363439 95 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 RNU4-76P-201ENST00000364509 141 ntBASIC0.37□□□□□ -2.35
CCDC88CQ9P219 Y_RNA.258-201ENST00000364613 105 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms