Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU2-19P-201ENST00000517288 84 ntBASIC2.28□□□□□ -2.04
COL20A1Q9P218 DEFB108E-201ENST00000524692 240 ntBASIC2.28□□□□□ -2.04
COL20A1Q9P218 AC023157.2-201ENST00000540596 141 ntBASIC2.28□□□□□ -2.04
COL20A1Q9P218 AC015712.3-201ENST00000559380 164 ntBASIC2.28□□□□□ -2.04
COL20A1Q9P218 MIR4769-201ENST00000584126 77 ntBASIC2.28□□□□□ -2.04
COL20A1Q9P218 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL20A1Q9P218 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.28□□□□□ -2.04
COL20A1Q9P218 MT-TG-201ENST00000387429 68 ntBASIC2.27□□□□□ -2.05
COL20A1Q9P218 HMGB3P3-201ENST00000510526 400 ntBASIC2.27□□□□□ -2.05
COL20A1Q9P218 AC097462.1-201ENST00000514125 324 ntBASIC2.27□□□□□ -2.05
COL20A1Q9P218 SERF1AP1-201ENST00000514575 187 ntBASIC2.27□□□□□ -2.05
COL20A1Q9P218 RPL21P9-201ENST00000556149 474 ntBASIC2.27□□□□□ -2.05
COL20A1Q9P218 AL512605.2-201ENST00000592972 256 ntBASIC2.27□□□□□ -2.05
COL20A1Q9P218 MIR6845-201ENST00000613182 61 ntBASIC2.27□□□□□ -2.05
COL20A1Q9P218 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL20A1Q9P218 Y_RNA.237-201ENST00000364439 102 ntBASIC2.26□□□□□ -2.05
COL20A1Q9P218 RNA5SP160-201ENST00000364866 120 ntBASIC2.26□□□□□ -2.05
COL20A1Q9P218 Y_RNA.562-201ENST00000384695 113 ntBASIC2.26□□□□□ -2.05
COL20A1Q9P218 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.26□□□□□ -2.05
COL20A1Q9P218 CYCSP49-201ENST00000420810 319 ntBASIC2.26□□□□□ -2.05
COL20A1Q9P218 HMGN2P23-201ENST00000456759 269 ntBASIC2.26□□□□□ -2.05
COL20A1Q9P218 RNU6-1132P-201ENST00000459214 107 ntBASIC2.26□□□□□ -2.05
COL20A1Q9P218 RNU7-99P-201ENST00000516271 62 ntBASIC2.26□□□□□ -2.05
COL20A1Q9P218 RNU7-172P-201ENST00000517125 64 ntBASIC2.26□□□□□ -2.05
COL20A1Q9P218 AC110588.1-201ENST00000559699 137 ntBASIC2.26□□□□□ -2.05
COL20A1Q9P218 AC069114.2-201ENST00000604699 304 ntBASIC2.26□□□□□ -2.05
COL20A1Q9P218 AC012640.5-201ENST00000623897 319 ntBASIC2.26□□□□□ -2.05
COL20A1Q9P218 AC005336.3-201ENST00000623833 2679 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 Y_RNA.14-201ENST00000362415 103 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 Y_RNA.16-201ENST00000362421 102 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 RNU1-22P-201ENST00000363334 158 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 Y_RNA.124-201ENST00000363339 93 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 Y_RNA.418-201ENST00000384029 102 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 SNORA48.1-201ENST00000390879 135 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 RNA5SP467-201ENST00000391274 118 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 RNU6-1186P-201ENST00000410429 97 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 RNA5SP450-201ENST00000411206 102 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 MTCO1P5-201ENST00000433573 344 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 AC069257.2-201ENST00000441819 155 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 RPL39P38-201ENST00000467018 153 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 AC010409.1-201ENST00000487382 476 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 RNU6-295P-201ENST00000516901 104 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 SCARNA24.2-201ENST00000516968 130 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 IGLV3-17-201ENST00000519099 244 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.25□□□□□ -2.05
COL20A1Q9P218 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL20A1Q9P218 MIRLET7G-201ENST00000362280 84 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 RNU4-80P-201ENST00000363200 141 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 Y_RNA.456-201ENST00000384232 111 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 RNU6-855P-201ENST00000410395 104 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 EBAG9P1-201ENST00000418955 543 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 AC099677.2-201ENST00000436385 175 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 AC003989.2-201ENST00000440224 169 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 AC055731.1-201ENST00000474387 401 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 RNU6-237P-201ENST00000515985 71 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.24□□□□□ -2.05
COL20A1Q9P218 DEFB122-202ENST00000569013 197 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 MIR3145-201ENST00000580727 82 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 AC022513.1-201ENST00000624512 117 ntBASIC2.24□□□□□ -2.05
COL20A1Q9P218 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL20A1Q9P218 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL20A1Q9P218 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL20A1Q9P218 RNU6-1019P-201ENST00000364424 107 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 Y_RNA.341-201ENST00000365341 102 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 Y_RNA.350-201ENST00000365409 98 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 Y_RNA.368-201ENST00000365547 113 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 SNORA8-201ENST00000384574 139 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 MIR144-201ENST00000384886 86 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 MIR548H3-201ENST00000408771 118 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 RNU2-38P-201ENST00000410856 79 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 RNU7-94P-201ENST00000459576 63 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 RPL36AP21-201ENST00000490372 323 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 RNU6-191P-201ENST00000516295 94 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 RNU6-1337P-201ENST00000516525 95 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 MIR5094-201ENST00000578766 85 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 AC012433.1-201ENST00000588916 398 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 AC006006.1-201ENST00000603082 144 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 AC008555.8-201ENST00000623602 2168 ntBASIC2.23□□□□□ -2.05
COL20A1Q9P218 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.23□□□□□ -2.05
COL20A1Q9P218 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL20A1Q9P218 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL20A1Q9P218 RNA5SP99-201ENST00000364020 114 ntBASIC2.22□□□□□ -2.05
COL20A1Q9P218 Y_RNA.352-201ENST00000365439 102 ntBASIC2.22□□□□□ -2.05
COL20A1Q9P218 Y_RNA.478-201ENST00000384358 107 ntBASIC2.22□□□□□ -2.05
COL20A1Q9P218 RNU6-376P-201ENST00000384731 106 ntBASIC2.22□□□□□ -2.05
COL20A1Q9P218 MIR562-201ENST00000384894 95 ntBASIC2.22□□□□□ -2.05
COL20A1Q9P218 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.22□□□□□ -2.05
COL20A1Q9P218 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.22□□□□□ -2.05
COL20A1Q9P218 RNA5SP501-201ENST00000410990 112 ntBASIC2.22□□□□□ -2.05
COL20A1Q9P218 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.22□□□□□ -2.05
COL20A1Q9P218 AC108210.2-201ENST00000503681 201 ntBASIC2.22□□□□□ -2.05
COL20A1Q9P218 AC121758.2-201ENST00000553271 193 ntBASIC2.22□□□□□ -2.05
COL20A1Q9P218 U2.14-201ENST00000615943 113 ntBASIC2.22□□□□□ -2.05
COL20A1Q9P218 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.22□□□□□ -2.05
COL20A1Q9P218 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COL20A1Q9P218 AL021397.1-201ENST00000451806 248 ntBASIC2.21□□□□□ -2.06
COL20A1Q9P218 AC091959.1-201ENST00000495857 238 ntBASIC2.21□□□□□ -2.06
COL20A1Q9P218 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.21□□□□□ -2.06
COL20A1Q9P218 SNORA27.4-201ENST00000516650 95 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms