Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 RNU2-27P-201ENST00000516185 142 ntBASIC3.41□□□□□ -1.86
NEUROD4Q9HD90 RNU6-113P-201ENST00000516653 101 ntBASIC3.41□□□□□ -1.86
NEUROD4Q9HD90 SNORA48.11-201ENST00000517015 89 ntBASIC3.41□□□□□ -1.86
NEUROD4Q9HD90 AC068657.1-201ENST00000520807 306 ntBASIC3.41□□□□□ -1.86
NEUROD4Q9HD90 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.41□□□□□ -1.86
NEUROD4Q9HD90 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NEUROD4Q9HD90 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NEUROD4Q9HD90 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.4□□□□□ -1.86
NEUROD4Q9HD90 snoU2-30.2-201ENST00000362805 70 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 SNORA33-201ENST00000363664 130 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 Y_RNA.163-201ENST00000363702 113 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 AL117342.1-201ENST00000404861 406 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 RNU2-63P-201ENST00000410792 194 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 AC003685.2-201ENST00000422795 395 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 AC104332.2-201ENST00000429959 156 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 RN7SL594P-201ENST00000470590 287 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 AC106707.2-201ENST00000484182 374 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 COX6CP6-201ENST00000490840 228 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 RNU6-844P-201ENST00000517175 102 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 MIR6079-201ENST00000635807 62 ntBASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEUROD4Q9HD90 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 Y_RNA.267-201ENST00000364679 109 ntBASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 MIR627-201ENST00000384979 97 ntBASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 MT-TI-201ENST00000387365 69 ntBASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 SNRPGP13-201ENST00000442212 177 ntBASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 RNU6-240P-201ENST00000516098 97 ntBASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 RNU6-1041P-201ENST00000516254 102 ntBASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 RNU6-1231P-201ENST00000517185 103 ntBASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 AL591926.4-201ENST00000616895 298 ntBASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 MIR338-201ENST00000636369 67 ntBASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 TNPO1P3-201ENST00000436471 2662 ntBASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NEUROD4Q9HD90 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 MIR126-201ENST00000362291 85 ntBASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 RNU6-1014P-201ENST00000383940 103 ntBASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 SNORA51.5-201ENST00000384126 131 ntBASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 RNU6-49P-201ENST00000384256 107 ntBASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 U8.11-201ENST00000384699 133 ntBASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 MIR1302-4-201ENST00000408701 150 ntBASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 U8.18-201ENST00000459285 133 ntBASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 RNU6-341P-201ENST00000516973 96 ntBASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 AC007229.1-201ENST00000590455 412 ntBASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 AL449363.1-201ENST00000617815 186 ntBASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 AC018630.2-201ENST00000534866 2403 ntBASIC3.38□□□□□ -1.87
NEUROD4Q9HD90 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 SNORA63.5-201ENST00000363548 123 ntBASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 MIR522-201ENST00000385071 87 ntBASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 MIR561-201ENST00000385216 97 ntBASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 AC018868.1-201ENST00000491307 315 ntBASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 RN7SKP282-201ENST00000516824 299 ntBASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 MIR3200-201ENST00000580767 85 ntBASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 MIR5195-201ENST00000583555 115 ntBASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.37□□□□□ -1.87
NEUROD4Q9HD90 AL021368.2-201ENST00000606125 5352 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 SNORD114-6-201ENST00000364393 72 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 RNU6-1131P-201ENST00000364955 107 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 Z92545.1-201ENST00000411782 234 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 ATP5A1P2-201ENST00000412323 255 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 AL035423.1-201ENST00000420331 213 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 FTH1P12-201ENST00000432137 551 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 RPS15AP28-201ENST00000435088 386 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 AL445687.1-201ENST00000439946 251 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 RPS26P48-201ENST00000491713 339 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 RNU6-1146P-201ENST00000516282 102 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 MIR4425-201ENST00000580572 84 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 MIR5197-201ENST00000583721 112 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 AL355297.2-201ENST00000604792 129 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 RNU6-94P-201ENST00000607728 107 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 AC022149.2-201ENST00000621061 203 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 MFSD8-233ENST00000641482 4860 ntBASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NEUROD4Q9HD90 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NEUROD4Q9HD90 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms