Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC244015.1-201ENST00000622301 99 ntBASIC1.34□□□□□ -2.19
VIPAS39Q9H9C1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
VIPAS39Q9H9C1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 Y_RNA.27-201ENST00000362540 103 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 SNORD115-30-201ENST00000364117 82 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 MT-TD-201ENST00000387419 68 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 AC108210.2-201ENST00000503681 201 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-155P-201ENST00000516347 100 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 RNU4-77P-201ENST00000516692 156 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 SNORD53B-201ENST00000577887 78 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 MIR3684-201ENST00000579779 74 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 MIR5188-201ENST00000583467 113 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 AC006380.1-201ENST00000603598 186 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 AC005828.6-201ENST00000606610 232 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 AL050343.2-201ENST00000607338 280 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 AC040896.1-201ENST00000613819 479 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 AC106754.2-201ENST00000623006 233 ntBASIC1.33□□□□□ -2.2
VIPAS39Q9H9C1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 MIR369-201ENST00000362155 70 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 Y_RNA.813-201ENST00000364639 102 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-308P-201ENST00000390957 107 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 SNORA67.6-201ENST00000391093 99 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 AL034345.1-201ENST00000407768 123 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 RPS27P16-201ENST00000425758 201 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 PGBD4P5-201ENST00000445958 426 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-1278P-201ENST00000516130 107 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-911P-201ENST00000516523 104 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 RNU2-56P-201ENST00000516826 190 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 MIR4778-201ENST00000577635 80 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 AL117336.2-201ENST00000602435 335 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 LARP7P1-201ENST00000605576 316 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 AC007485.1-201ENST00000616755 206 ntBASIC1.32□□□□□ -2.2
VIPAS39Q9H9C1 AC005592.1-201ENST00000566527 1640 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 SNORA1B-201ENST00000362535 133 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 Y_RNA.39-201ENST00000362620 98 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 Y_RNA.446-201ENST00000384178 104 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-505P-201ENST00000384427 107 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 AL031003.1-201ENST00000404229 172 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 RNU2-54P-201ENST00000410299 190 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 RNA5SP511-201ENST00000410487 115 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 AL160004.2-201ENST00000432935 350 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 RNA5SP445-201ENST00000515889 115 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 MIR4524B-201ENST00000581569 115 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 AC091178.2-201ENST00000584401 117 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 SNORD58B-201ENST00000607313 66 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 AC091925.1-201ENST00000623204 462 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 SNORD3E-202ENST00000627253 216 ntBASIC1.31□□□□□ -2.2
VIPAS39Q9H9C1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 Y_RNA.197-201ENST00000364004 102 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 Y_RNA.252-201ENST00000364556 101 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-117P-201ENST00000365415 107 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 RNY1P14-201ENST00000384426 108 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 CALM2P4-201ENST00000430810 426 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 AC027119.1-201ENST00000440877 241 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-976P-201ENST00000516086 111 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-902P-201ENST00000517212 91 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 AC015712.3-201ENST00000559380 164 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 AL080274.1-201ENST00000605565 220 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 AL078604.3-201ENST00000615580 211 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 AL606534.2-204ENST00000635008 178 ntBASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 RNU5E-4P-201ENST00000364931 120 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-867P-201ENST00000364956 107 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 RNA5SP190-201ENST00000365222 118 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 SNORA67.5-201ENST00000391036 107 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 Y_RNA.621-201ENST00000411065 96 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 RPL30P13-201ENST00000418873 348 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 CYCSP49-201ENST00000420810 319 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 snoU13.23-201ENST00000458863 104 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-341P-201ENST00000516973 96 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 RPS29P30-201ENST00000600975 111 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 AC073349.3-201ENST00000617616 186 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 AL121890.5-201ENST00000620848 304 ntBASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.29□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-60P-201ENST00000364792 103 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 RNU6-1175P-201ENST00000365200 107 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 SNORD116-13-201ENST00000384408 92 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 MIR764-201ENST00000390811 85 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 U8.16-201ENST00000391279 133 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 AL354751.2-201ENST00000415471 210 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 AC245517.4-201ENST00000448601 281 ntBASIC1.28□□□□□ -2.2
VIPAS39Q9H9C1 AC093850.1-201ENST00000454121 251 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms